RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 RALGDSQ12967 914 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 SRSF9Q13242 221 aaKnown RBP eCLIP2.86□□□□□ -1.95
SMC4-227ENST00000497984 RALBP1Q15311 655 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 EXT1Q16394 746 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 PRR30Q53SZ7 412 aaPredicted RBP2.86□□□□□ -1.95
SMC4-227ENST00000497984 C6orf163Q5TEZ5 329 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 NAA16Q6N069 864 aaPredicted RBP2.86□□□□□ -1.95
SMC4-227ENST00000497984 RBPMS2Q6ZRY4 209 aaKnown RBP2.86□□□□□ -1.95
SMC4-227ENST00000497984 IL17RELQ6ZVW7 336 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 FCRLAQ7L513 359 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 KRT74Q7RTS7 529 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 ADCK1Q86TW2 530 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 KLHDC1Q8N7A1 406 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 XXYLT1Q8NBI6 393 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 OR7A2PQ8NGA2 310 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 ROBO4Q8WZ75 1007 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 ZNF597Q96LX8 424 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 NYXQ9GZU5 481 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 ELF5Q9UKW6 265 aaPredicted RBP2.86□□□□□ -1.95
SMC4-227ENST00000497984 SELENOKQ9Y6D0 94 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 R4GN57 208 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 RALGAPA1Q6GYQ0 2036 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 IGSF1Q8N6C5 1336 aa2.86□□□□□ -1.95
SMC4-227ENST00000497984 SNX3O60493 162 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 ZNF354AO60765 605 aaPredicted RBP2.85□□□□□ -1.95
SMC4-227ENST00000497984 ATP1B1P05026 303 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 MYOGP15173 224 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 CAPZA2P47755 286 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 RAB28P51157 221 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 DNA2P51530 1060 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 POLR2LP62875 67 aaKnown RBP2.85□□□□□ -1.95
SMC4-227ENST00000497984 NDPQ00604 133 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 CDH18Q13634 790 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 PTPN14Q15678 1187 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 LETM2Q2VYF4 491 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 GPR33Q49SQ1 333 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 CFAP58Q5T655 872 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 ERMARDQ5T6L9 678 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 FHL5Q5TD97 284 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 BAIAP2L2Q6UXY1 529 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 CDHR3Q6ZTQ4 885 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 ENOSF1Q7L5Y1 443 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 PCGF5Q86SE9 256 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 PIK3R3Q92569 461 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 HDAC11Q96DB2 347 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 CHCHD5Q9BSY4 110 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 GPN1Q9HCN4 374 aaPredicted RBP2.85□□□□□ -1.95
SMC4-227ENST00000497984 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.85□□□□□ -1.95
SMC4-227ENST00000497984 TXNDC16Q9P2K2 825 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 PRDM4Q9UKN5 801 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 PA2G4Q9UQ80 394 aaKnown RBP2.85□□□□□ -1.95
SMC4-227ENST00000497984 VSIG4Q9Y279 399 aa2.85□□□□□ -1.95
SMC4-227ENST00000497984 MYH14Q7Z406 1995 aaKnown RBP2.85□□□□□ -1.95
SMC4-227ENST00000497984 ATP6AP2O75787 350 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 SLCO2B1O94956 709 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 ADRB2P07550 413 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 MYBL1P10243 752 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 KLK2P20151 261 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 ELAVL4P26378 380 aaKnown RBP2.84□□□□□ -1.95
SMC4-227ENST00000497984 SOX3P41225 446 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 OR3A2P47893 321 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 CST9LP1Q5W188 147 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 KRT39Q6A163 491 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 ZBTB49Q6ZSB9 765 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 ZER1Q7Z7L7 766 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 ZBED8Q8IZ13 594 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 PARP8Q8N3A8 854 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 C9orf43Q8TAL5 461 aaPredicted RBP2.84□□□□□ -1.95
SMC4-227ENST00000497984 CHURC1Q8WUH1 139 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 PROX1Q92786 737 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 CDCA3Q99618 268 aaPredicted RBP2.84□□□□□ -1.95
SMC4-227ENST00000497984 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 GTSE1Q9NYZ3 720 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 TBC1D7Q9P0N9 293 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.84□□□□□ -1.95
SMC4-227ENST00000497984 RNF150Q9ULK6 438 aa2.84□□□□□ -1.95
SMC4-227ENST00000497984 IL16Q14005 1332 aa2.84□□□□□ -1.96
SMC4-227ENST00000497984 ARID2Q68CP9 1835 aa2.84□□□□□ -1.96
SMC4-227ENST00000497984 SRRM4A7MD48 611 aaKnown RBP2.83□□□□□ -1.96
SMC4-227ENST00000497984 SNURFLB1AK76 121 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 FPGTO14772 594 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 RPS6KA5O75582 802 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 PSMD10O75832 226 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 FYNP06241 537 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 MC5RP33032 325 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 HLCSP50747 726 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 LYZP61626 148 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 RBPJQ06330 500 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 ILF2Q12905 390 aaKnown RBP2.83□□□□□ -1.96
SMC4-227ENST00000497984 OPCMLQ14982 345 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 MS4A18Q3C1V0 323 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 SPECC1Q5M775 1068 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 FAM182AQ5T1J6 154 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 LCLAT1Q6UWP7 414 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 TLK2Q86UE8 772 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 RCOR2Q8IZ40 523 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 GPC2Q8N158 579 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 OR4D10Q8NGI6 311 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 KCNE4Q8WWG9 221 aa2.83□□□□□ -1.96
SMC4-227ENST00000497984 METTL21AQ8WXB1 218 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms