RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, human

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-210	ENST00000497730	ELAVL4	P26378	380 aa	Known RBP	4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	DUT	P33316	252 aa	Known RBP	4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	SOX3	P41225	446 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	ROR1	Q01973	937 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	IL10RB	Q08334	325 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	SCARB2	Q14108	478 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	CDO1	Q16878	200 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	TWISTNB	Q3B726	338 aa	Predicted RBP	4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	HECTD3	Q5T447	861 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	FAM46C	Q5VWP2	391 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	KRT77	Q7Z794	578 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	PHLDB2	Q86SQ0	1253 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	CCDC60	Q8IWA6	550 aa	Predicted RBP	4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	GPC2	Q8N158	579 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	GOT1L1	Q8NHS2	421 aa	Predicted RBP	4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	GRK7	Q8WTQ7	553 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	RBM41	Q96IZ5	413 aa	Known RBP	4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	ZWILCH	Q9H900	591 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	SPHK2	Q9NRA0	654 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	PANK4	Q9NVE7	773 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	TBC1D13	Q9NVG8	400 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	GTF3C4	Q9UKN8	822 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730	ITGA11	Q9UKX5	1188 aa		4.92	□□□□□ -1.62
TRA2A-210	ENST00000497730		H3BMM5	538 aa		4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	HSP90AB1	P08238	724 aa	Known RBP	4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	TIA1	P31483	386 aa	Known RBP eCLIP	4.91	□□□□□ -1.62	3e-7	■□□□□ 8.7
TRA2A-210	ENST00000497730	DCDC1	P59894	354 aa		4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	SPOUT1	Q5T280	376 aa	Known RBP	4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730		Q6ZRP5	223 aa		4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	CPEB2	Q7Z5Q1	589 aa	Known RBP	4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	TCEANC	Q8N8B7	351 aa		4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	NCOA7	Q8NI08	942 aa		4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	CORO2A	Q92828	525 aa		4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	MR1	Q95460	341 aa		4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	WBP2	Q969T9	261 aa		4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	C2orf48	Q96LS8	159 aa		4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	NEDD4L	Q96PU5	975 aa		4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	USP28	Q96RU2	1077 aa		4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	TDRD1	Q9BXT4	1180 aa	Known RBP	4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	ZDHHC18	Q9NUE0	388 aa		4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	SLC12A6	Q9UHW9	1150 aa		4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	ELF5	Q9UKW6	265 aa	Predicted RBP	4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	SELENOK	Q9Y6D0	94 aa		4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	CSNK1G3	Q9Y6M4	447 aa		4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	COLEC10	Q9Y6Z7	277 aa		4.91	□□□□□ -1.62
TRA2A-210	ENST00000497730	IGLV7-46	A0A075B6I9	117 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	MTMR11	A4FU01	709 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730		E5RGE8	158 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	SELENOF	O60613	162 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	SLU7	O95391	586 aa	Known RBP	4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	IGHE	P01854	428 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	ANKRD34C	P0C6C1	535 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	ZNF883	P0CG24	379 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	CD59	P13987	128 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	CAST	P20810	708 aa	Known RBP	4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	SOAT1	P35610	550 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	TSFM	P43897	325 aa	Known RBP	4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	OR3A2	P47893	321 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	CLDN17	P56750	224 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	ZRANB3	Q5FWF4	1079 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	FGD3	Q5JSP0	725 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	ZNF497	Q6ZNH5	498 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	C4orf19	Q8IY42	314 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	ZNF519	Q8TB69	540 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	DNASE1L2	Q92874	299 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	NXPE2	Q96DL1	559 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	POM121L2	Q96KW2	1035 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	LINC00479	Q96M42	142 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	KRT12	Q99456	494 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	HACD3	Q9P035	362 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	DNAJB9	Q9UBS3	223 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	IL36A	Q9UHA7	158 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	GMEB2	Q9UKD1	530 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	NSG2	Q9Y328	171 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	KLK4	Q9Y5K2	254 aa		4.9	□□□□□ -1.63
TRA2A-210	ENST00000497730	TRAV18	A0A075B6X5	111 aa		4.89	□□□□□ -1.63
TRA2A-210	ENST00000497730	ST8SIA3	O43173	380 aa		4.89	□□□□□ -1.63
TRA2A-210	ENST00000497730	CGA	P01215	116 aa		4.89	□□□□□ -1.63
TRA2A-210	ENST00000497730	EEF2	P13639	858 aa	Known RBP	4.89	□□□□□ -1.63
TRA2A-210	ENST00000497730	AADAC	P22760	399 aa		4.89	□□□□□ -1.63
TRA2A-210	ENST00000497730	FOLH1	Q04609	750 aa		4.89	□□□□□ -1.63
TRA2A-210	ENST00000497730	MTF1	Q14872	753 aa		4.89	□□□□□ -1.63
TRA2A-210	ENST00000497730	TAB1	Q15750	504 aa		4.89	□□□□□ -1.63
TRA2A-210	ENST00000497730	MSANTD1	Q6ZTZ1	278 aa		4.89	□□□□□ -1.63
TRA2A-210	ENST00000497730	CREBRF	Q8IUR6	639 aa		4.89	□□□□□ -1.63
TRA2A-210	ENST00000497730	NKAIN3	Q8N8D7	197 aa		4.89	□□□□□ -1.63
TRA2A-210	ENST00000497730	SLCO2A1	Q92959	643 aa		4.89	□□□□□ -1.63
TRA2A-210	ENST00000497730	ARMCX3	Q9UH62	379 aa	Predicted RBP	4.89	□□□□□ -1.63
TRA2A-210	ENST00000497730	PILRB	Q9UKJ0	227 aa		4.89	□□□□□ -1.63
TRA2A-210	ENST00000497730	IGKV3D-15	A0A087WSY6	115 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	YDJC	A8MPS7	323 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	SLC1A7	O00341	560 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	PSMA7	O14818	248 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	IFIT3	O14879	490 aa	Known RBP	4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	CYTIP	O60759	359 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	MOCS2	O96007	188 aa	Predicted RBP	4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	YES1	P07947	543 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	SUPT20HL2	P0C7V6	817 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	SP9	P0CG40	484 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms