RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 C17orf105B2RV13 164 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 SNX3O60493 162 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 CIDEAO60543 219 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 NOL3O60936 208 aaKnown RBP3.34□□□□□ -1.87
CLK1-214ENST00000496205 GPIP06744 558 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 PCP11498 1178 aaKnown RBP3.34□□□□□ -1.87
CLK1-214ENST00000496205 NT5C2P49902 561 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 NME5P56597 212 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 YBEYP58557 167 aaPredicted RBP3.34□□□□□ -1.87
CLK1-214ENST00000496205 EXT1Q16394 746 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 PHKG1Q16816 387 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 LYSMD4Q5XG99 296 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 MARK2Q7KZI7 788 aaKnown RBP3.34□□□□□ -1.87
CLK1-214ENST00000496205 KCTD9Q7L273 389 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 ADCK1Q86TW2 530 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 RPAINQ86UA6 219 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 PIGZQ86VD9 579 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 HDDC3Q8N4P3 179 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 OR4C3Q8NH37 302 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 RNASE8Q8TDE3 154 aaKnown RBP3.34□□□□□ -1.87
CLK1-214ENST00000496205 CENPTQ96BT3 561 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 RUNDC3BQ96NL0 473 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 KLHL5Q96PQ7 755 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 EPYCQ99645 322 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 ACPTQ9BZG2 426 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 ZMYND12Q9H0C1 365 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 SRD5A3Q9H8P0 318 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 SIX2Q9NPC8 291 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 SCRT2Q9NQ03 307 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 FGF21Q9NSA1 209 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 DNAJC17Q9NVM6 304 aaKnown RBP3.34□□□□□ -1.87
CLK1-214ENST00000496205 SH3BGRL2Q9UJC5 107 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 NOCTQ9UK39 431 aaKnown RBP3.34□□□□□ -1.87
CLK1-214ENST00000496205 GPR132Q9UNW8 380 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 GAB2Q9UQC2 676 aa3.34□□□□□ -1.87
CLK1-214ENST00000496205 TRBV5-5A0A0J9YX44 114 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 A0A1B0GU03 582 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 A0A1W2PRV1 198 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 KRT87PA6NCN2 255 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 C2orf81A6NN90 581 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 H3BMM5 538 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 P2RY10O00398 339 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 SLC33A1O00400 549 aaPredicted RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 TTI1O43156 1089 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 PRKRAO75569 313 aaKnown RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 LUC7L3O95232 432 aaKnown RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 NADKO95544 446 aaPredicted RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 GUCA1CO95843 209 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 CRYAAP02489 173 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 SLC4A1P02730 911 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 F3P13726 295 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 PAX1P15863 534 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 RPS2P15880 293 aaKnown RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 CEACAM8P31997 349 aaPredicted RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 PEX19P40855 299 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 FRKP42685 505 aaPredicted RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 MAGEB1P43366 347 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 SNU13P55769 128 aaKnown RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 MAZP56270 477 aaKnown RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 ST8SIA6P61647 398 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 GPR17Q13304 367 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 FCN2Q15485 313 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 HFEQ30201 348 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 OR4C11Q6IEV9 310 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 C19orf48Q6RUI8 117 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 UNC5DQ6UXZ4 953 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 RBMS3Q6XE24 437 aaKnown RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 SLC16A9Q7RTY1 509 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 C5orf24Q7Z6I8 188 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 TRPT1Q86TN4 253 aaKnown RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 MYPOPQ86VE0 399 aaPredicted RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 EXOC3L1Q86VI1 746 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 KLHDC8BQ8IXV7 354 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 TDHQ8IZJ6 230 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 RTL3Q8N8U3 475 aaKnown RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 ZNF485Q8NCK3 441 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 ZNF524Q96C55 264 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 SNRNP40Q96DI7 357 aaKnown RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 EEF2KMTQ96G04 330 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 RBM41Q96IZ5 413 aaKnown RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 LSG1Q9H089 658 aaKnown RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 THAP2Q9H0W7 228 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 ACTL8Q9H568 366 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 BICC1Q9H694 974 aaKnown RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 RAVER2Q9HCJ3 691 aaKnown RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 PNPLA3Q9NST1 481 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 INTS9Q9NV88 658 aaKnown RBP3.33□□□□□ -1.88
CLK1-214ENST00000496205 ANO10Q9NW15 660 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 SLCO1C1Q9NYB5 712 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 DUSP12Q9UNI6 340 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 TNNQ9UQP3 1299 aa3.33□□□□□ -1.88
CLK1-214ENST00000496205 IGHV4-61A0A0C4DH41 118 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 MTMR11A4FU01 709 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 C5orf51A6NDU8 294 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 C2CD4DB7Z1M9 353 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 MPHOSPH10O00566 681 aaKnown RBP3.32□□□□□ -1.88
CLK1-214ENST00000496205 STAM2O75886 525 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 GH1P01241 217 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 IGHV4-59P01825 116 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms