RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PCDHB11Q9Y5F2 797 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 PCDHGA7Q9Y5G6 932 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 CACNA1AO00555 2505 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 ARHGEF17Q96PE2 2063 aaPredicted RBP9.89□□□□□ -0.83
HDAC3-214ENST00000495485 SPTBN2O15020 2390 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 ADAMTS9Q9P2N4 1935 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 DNAH14Q0VDD8 3507 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 A0A1W2PR77 199 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 TLR4O00206 839 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 PDE5AO76074 875 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 CFIP05156 583 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 ERGP11308 486 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 S100A3P33764 101 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 GCKP35557 465 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 GSTM5P46439 218 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 RXRGP48443 463 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 RAB28P51157 221 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 BLKP51451 505 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 CCR8P51685 355 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 EEFSECP57772 596 aaKnown RBP9.88□□□□□ -0.83
HDAC3-214ENST00000495485 ABATP80404 500 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 SPEM2Q0P670 501 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 ILF3Q12906 894 aaKnown RBP eCLIP9.88□□□□□ -0.83
HDAC3-214ENST00000495485 PWP1Q13610 501 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 RCN1Q15293 331 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 LPAL2Q16609 132 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 CCSMST1Q4G0I0 132 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 NOXRED1Q6NXP6 359 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 ARMCX6Q7L4S7 300 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 PAGE2Q7Z2X7 111 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 R3HCC1LQ7Z5L2 792 aaKnown RBP9.88□□□□□ -0.83
HDAC3-214ENST00000495485 GPR180Q86V85 440 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 HID1Q8IV36 788 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 AVL9Q8NBF6 648 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 GOLM1Q8NBJ4 401 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 OR7G3Q8NG95 312 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 OR2L8Q8NGY9 312 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 HMGCLL1Q8TB92 370 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 NETO1Q8TDF5 533 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 WDR60Q8WVS4 1066 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 NEIL2Q969S2 332 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 TESCQ96BS2 214 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 CCDC124Q96CT7 223 aaKnown RBP9.88□□□□□ -0.83
HDAC3-214ENST00000495485 CXorf40BQ96DE9 158 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 RSRC1Q96IZ7 334 aaKnown RBP9.88□□□□□ -0.83
HDAC3-214ENST00000495485 CAMK1GQ96NX5 476 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 QRFPRQ96P65 431 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 TMEM9BQ9NQ34 198 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 GPR27Q9NS67 375 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 TMEM74BQ9NUR3 256 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 DNAAF2Q9NVR5 837 aaKnown RBP9.88□□□□□ -0.83
HDAC3-214ENST00000495485 TRNAU1APQ9NX07 287 aaKnown RBP9.88□□□□□ -0.83
HDAC3-214ENST00000495485 TMEM181Q9P2C4 612 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 GIMAP2Q9UG22 337 aa9.88□□□□□ -0.83
HDAC3-214ENST00000495485 WBP11Q9Y2W2 641 aaKnown RBP9.88□□□□□ -0.83
HDAC3-214ENST00000495485 TMEM131Q92545 1883 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 OR5K4A6NMS3 321 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 H0Y3Z8 333 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 ERN1O75460 977 aaKnown RBP9.87□□□□□ -0.83
HDAC3-214ENST00000495485 BCAS2O75934 225 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-214ENST00000495485 RASGRP1O95267 797 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 THEGLP0DJG4 465 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 BCKDHAP12694 445 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 HSD17B1P14061 328 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 CAPN3P20807 821 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 TGM1P22735 817 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 RPL10P27635 214 aaKnown RBP9.87□□□□□ -0.83
HDAC3-214ENST00000495485 CMPK1P30085 196 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 SHMT2P34897 504 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 VHLP40337 213 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 CTSKP43235 329 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 NEK2P51955 445 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 HNRNPFP52597 415 aaKnown RBP9.87□□□□□ -0.83
HDAC3-214ENST00000495485 SRP54P61011 504 aaKnown RBP9.87□□□□□ -0.83
HDAC3-214ENST00000495485 DDX39BQ13838 428 aaKnown RBP9.87□□□□□ -0.83
HDAC3-214ENST00000495485 SLBPQ14493 270 aaKnown RBP eCLIP9.87□□□□□ -0.83
HDAC3-214ENST00000495485 KIAA0040Q15053 153 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 ZXDCQ2QGD7 858 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-214ENST00000495485 TIGD2Q4W5G0 525 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 ABRAXAS1Q6UWZ7 409 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 LAYNQ6UX15 382 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 TMIGD1Q6UXZ0 262 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 DHDDSQ86SQ9 333 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 DHFR2Q86XF0 187 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 PROSER1Q86XN7 944 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 TMEM126BQ8IUX1 230 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.87□□□□□ -0.83
HDAC3-214ENST00000495485 LRRC56Q8IYG6 542 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-214ENST00000495485 PHACTR4Q8IZ21 702 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 TMEM132CQ8N3T6 1108 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 NATD1Q8N6N6 113 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 CATSPER1Q8NEC5 780 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 OR8J3Q8NGG0 315 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 SLC13A3Q8WWT9 602 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 ZUFSPQ96AP4 578 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 ITCHQ96J02 903 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 OR4K3Q96R72 315 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 OR52E6Q96RD3 313 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 INSM2Q96T92 566 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-214ENST00000495485 HBEGFQ99075 208 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms