RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 ZIM3Q96PE6 472 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 EFCAB11Q9BUY7 163 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 SARGQ9BW04 601 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 PITHD1Q9GZP4 211 aaPredicted RBP11.91□□□□□ -0.5
TRA2A-209ENST00000494255 IQCGQ9H095 443 aaKnown RBP11.91□□□□□ -0.5
TRA2A-209ENST00000494255 LOC101059948A0A1B0GTJ6 334 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 A8MT66 165 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 C9J4A7 227 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 CTIFO43310 598 aaKnown RBP11.9□□□□□ -0.5
TRA2A-209ENST00000494255 SIX3O95343 332 aaPredicted RBP11.9□□□□□ -0.5
TRA2A-209ENST00000494255 PIM1P11309 404 aaPredicted RBP11.9□□□□□ -0.5
TRA2A-209ENST00000494255 TCN2P20062 427 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 ATP5F1P24539 256 aaPredicted RBP11.9□□□□□ -0.5
TRA2A-209ENST00000494255 ITPKBP27987 946 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 CRHR1P34998 444 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 AHRP35869 848 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 DLSTP36957 453 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 DCDP81605 110 aaKnown RBP11.9□□□□□ -0.5
TRA2A-209ENST00000494255 SLC18A2Q05940 514 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 CHIT1Q13231 466 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 GTF2H2Q13888 395 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 SLBPQ14493 270 aaKnown RBP eCLIP11.9□□□□□ -0.5
TRA2A-209ENST00000494255 HIST2H2ACQ16777 129 aaPredicted RBP11.9□□□□□ -0.5
TRA2A-209ENST00000494255 PAGE2BQ5JRK9 111 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 BEND6Q5SZJ8 279 aaPredicted RBP11.9□□□□□ -0.5
TRA2A-209ENST00000494255 GARNL3Q5VVW2 1013 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 HIST2H2AA3Q6FI13 130 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 GTF2H2CQ6P1K8 395 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 SH2D5Q6ZV89 423 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 GOLGA7Q7Z5G4 137 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 VN1R4Q7Z5H5 301 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 SLC22A9Q8IVM8 553 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 CCDC63Q8NA47 563 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 ZSCAN1Q8NBB4 408 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 ZNF740Q8NDX6 193 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 TRPV3Q8NET8 790 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 TTLQ8NG68 377 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 CT55Q8WUE5 264 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 SLC13A3Q8WWT9 602 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 GBP5Q96PP8 586 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 C17orf62Q9BQA9 187 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 SPNS1Q9H2V7 528 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 CENPHQ9H3R5 247 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 PRM3Q9NNZ6 103 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 ARGLU1Q9NWB6 273 aaPredicted RBP11.9□□□□□ -0.5
TRA2A-209ENST00000494255 GEMIN8Q9NWZ8 242 aaKnown RBP11.9□□□□□ -0.5
TRA2A-209ENST00000494255 SENP1Q9P0U3 644 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 KCND3Q9UK17 655 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 CROTQ9UKG9 612 aa11.9□□□□□ -0.5
TRA2A-209ENST00000494255 RUVBL1Q9Y265 456 aaKnown RBP11.9□□□□□ -0.5
TRA2A-209ENST00000494255 AHCTF1Q8WYP5 2266 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 CHD8Q9HCK8 2581 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 LRRC14BA6NHZ5 514 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 C21orf140B9A014 251 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 P2RX6O15547 441 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 STATHP02808 62 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 SERPIND1P05546 499 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 SBK3P0C264 359 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 MYL2P10916 166 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 LIFP15018 202 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 GSTM2P28161 218 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 ARL1P40616 181 aaPredicted RBP11.89□□□□□ -0.51
TRA2A-209ENST00000494255 GCGRP47871 477 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 SCTRP47872 440 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 TMPRSS3P57727 454 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 NFKB2Q00653 900 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 RGS1Q08116 209 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 DNASE1L3Q13609 305 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 DOC2AQ14183 400 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 HKDC1Q2TB90 917 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 NKAIN1Q4KMZ8 207 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 FAM199XQ6PEV8 388 aaPredicted RBP11.89□□□□□ -0.51
TRA2A-209ENST00000494255 TMIGD1Q6UXZ0 262 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 CCDC81Q6ZN84 652 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 TMEM151AQ8N4L1 468 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 MYRIPQ8NFW9 859 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 UBE2E3Q969T4 207 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 ATP6V1E2Q96A05 226 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 CCDC126Q96EE4 140 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 WDR34Q96EX3 536 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 APOPT1Q96IL0 206 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 SMC6Q96SB8 1091 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 RUFY1Q96T51 708 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 CHST8Q9H2A9 424 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 NT5DC2Q9H857 520 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 SYNPO2LQ9H987 977 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 MKS1Q9NXB0 559 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 IFT80Q9P2H3 777 aaPredicted RBP11.89□□□□□ -0.51
TRA2A-209ENST00000494255 GPN3Q9UHW5 284 aaPredicted RBP11.89□□□□□ -0.51
TRA2A-209ENST00000494255 ZFP69BQ9UJL9 534 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 MID2Q9UJV3 735 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 CDC14AQ9UNH5 594 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 ACACBO00763 2458 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 TPRP12270 2363 aaKnown RBP11.89□□□□□ -0.51
TRA2A-209ENST00000494255 IGF2RP11717 2491 aa11.89□□□□□ -0.51
TRA2A-209ENST00000494255 E2F3O00716 465 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 PRPF4O43172 522 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRA2A-209ENST00000494255 NDUFS4O43181 175 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 DLX3O60479 287 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms