RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 TRIM48Q8IWZ4 208 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 CENPLQ8N0S6 344 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-219ENST00000491747 ZCCHC14Q8WYQ9 949 aaKnown RBP9.08□□□□□ -0.96
BRCA1-219ENST00000491747 SH3KBP1Q96B97 665 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 LIN37Q96GY3 246 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-219ENST00000491747 FAR2Q96K12 515 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 BIRC8Q96P09 236 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 SEMA6AQ9H2E6 1030 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 MRPL46Q9H2W6 279 aaKnown RBP9.08□□□□□ -0.96
BRCA1-219ENST00000491747 UCK1Q9HA47 277 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 IMP3Q9NV31 184 aaKnown RBP9.08□□□□□ -0.96
BRCA1-219ENST00000491747 ZMIZ1Q9ULJ6 1067 aa9.08□□□□□ -0.96
BRCA1-219ENST00000491747 MAP1BP46821 2468 aaKnown RBP9.08□□□□□ -0.96
BRCA1-219ENST00000491747 ZFHX4Q86UP3 3567 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 SLC5A10A0PJK1 596 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 C7orf72A4D263 438 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 LILRA5A6NI73 299 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 H3BNH8 94 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 SDHDO14521 159 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 TLX3O43711 291 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-219ENST00000491747 IMPDH2P12268 514 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 SLC7A1P30825 629 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 ALDH3B2P48448 385 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 EPHA4P54764 986 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 SQLEQ14534 574 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 TYSND1Q2T9J0 566 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 CTSL3PQ5NE16 218 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 PHF19Q5T6S3 580 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 TMEM71Q6P5X7 295 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 VRK3Q8IV63 474 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 OR4D9Q8NGE8 314 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 OR10G6Q8NH81 332 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 ELMO1Q92556 727 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 RSC1A1Q92681 617 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 NXPE2Q96DL1 559 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 DUS3LQ96G46 650 aaKnown RBP9.07□□□□□ -0.96
BRCA1-219ENST00000491747 AHCYL2Q96HN2 611 aaKnown RBP9.07□□□□□ -0.96
BRCA1-219ENST00000491747 CCDC74BQ96LY2 380 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 TMEM74Q96NL1 305 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-219ENST00000491747 POLR1BQ9H9Y6 1135 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 RHBDL2Q9NX52 303 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 DKK4Q9UBT3 224 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 RNF11Q9Y3C5 154 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 SNX13Q9Y5W8 968 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 CELSR3Q9NYQ7 3312 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 CCDC187A0A096LP49 1063 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 E7ENX8 843 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 UBXN7O94888 489 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 FTH1P02794 183 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 SLC35G4P0C7Q5 338 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 OR56A5P0C7T3 313 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 ITIH1P19827 911 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 ETV5P41161 510 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 LSSP48449 732 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 TTPAP49638 278 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 EMP3P54852 163 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 GFERP55789 205 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 NUP107P57740 925 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 PPP1CAP62136 330 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 ESRRGP62508 458 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 CTBP1Q13363 440 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 TMED1Q13445 227 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 FASTKQ14296 549 aaKnown RBP9.07□□□□□ -0.96
BRCA1-219ENST00000491747 AARS2Q5JTZ9 985 aaKnown RBP9.07□□□□□ -0.96
BRCA1-219ENST00000491747 IRAK1BP1Q5VVH5 260 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 NEPROQ6NW34 567 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 GK5Q6ZS86 529 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 RAB11FIP2Q7L804 512 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 PROSER1Q86XN7 944 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 DENND6AQ8IWF6 608 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 LRTOMTQ8WZ04 291 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 LPGAT1Q92604 370 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 PPWD1Q96BP3 646 aaKnown RBP9.07□□□□□ -0.96
BRCA1-219ENST00000491747 CCDC126Q96EE4 140 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 MRPL57Q9BQC6 102 aaKnown RBP9.07□□□□□ -0.96
BRCA1-219ENST00000491747 ANKRD60Q9BZ19 345 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 PCDHAC1Q9H158 963 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 CLK4Q9HAZ1 481 aaKnown RBP9.07□□□□□ -0.96
BRCA1-219ENST00000491747 EML4Q9HC35 981 aaKnown RBP9.07□□□□□ -0.96
BRCA1-219ENST00000491747 ASCL3Q9NQ33 180 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 GALPQ9UBC7 116 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 FAF1Q9UNN5 650 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-219ENST00000491747 ACACBO00763 2458 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 IGF2RP11717 2491 aa9.07□□□□□ -0.96
BRCA1-219ENST00000491747 TCRBV3S1A0A5B6 114 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 UBA6A0AVT1 1052 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 A8MU76 341 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 PSMD12O00232 456 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 PRMT5O14744 637 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 DUX1O43812 170 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 NDUFS3O75489 264 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 S1PR4O95977 384 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 AHSGP02765 367 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 ACADLP28330 430 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 FMO4P31512 558 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 DNAJB13P59910 316 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 BOP1Q14137 746 aaKnown RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 ST3GAL2Q16842 350 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 MTX3Q5HYI7 312 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms