RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 AIF1LQ9BQI0 150 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CD244Q9BZW8 370 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ZNF358Q9NW07 568 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 TBK1Q9UHD2 729 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PADI2Q9Y2J8 665 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 MAP2K7O14733 419 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CLGNO14967 610 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 OR1F1O43749 312 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 STATHP02808 62 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 C1GALT1C1LP0DN25 315 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 GFAPP14136 432 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 AGTR2P50052 363 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PDK4Q16654 411 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 NDUFA9Q16795 377 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 MLIPQ5VWP3 458 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PRMT9Q6P2P2 845 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ASPGQ86U10 573 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ARHGEF39Q8N4T4 335 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 DTWD1Q8N5C7 304 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CAMKVQ8NCB2 501 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ZNF740Q8NDX6 193 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CAVIN3Q969G5 261 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 FKBP10Q96AY3 582 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CATSPER2Q96P56 530 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PARD6BQ9BYG5 372 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 SPNS1Q9H2V7 528 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 SLC22A11Q9NSA0 550 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CPSF2Q9P2I0 782 aaKnown RBP15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 XPR1Q9UBH6 696 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 TCFL5Q9UL49 500 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ASB1Q9Y576 335 aa15.51■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PTPRQQ9UMZ3 2332 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 K7EPI3 171 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 KLK8O60259 260 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ONECUT2O95948 504 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 RECKO95980 971 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CD63P08962 238 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 SLC35G6P0C7Q6 338 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 VARSP26640 1264 aaKnown RBP15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 SLCO1A2P46721 670 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 SCTRP47872 440 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 OR1D4P47884 311 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ALDH18A1P54886 795 aaKnown RBP15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 NFKB2Q00653 900 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ERV3-1Q14264 604 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 SETDB1Q15047 1291 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PFKFB4Q16877 469 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ATP1A1-AS1Q5TC04 95 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ATG9BQ674R7 924 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 MRPL14Q6P1L8 145 aaKnown RBP15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 SLCO4C1Q6ZQN7 724 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 COX15Q7KZN9 410 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 TDRPQ86YL5 185 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ACMSDQ8TDX5 336 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 EPS8L3Q8TE67 593 aaKnown RBP15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 MZB1Q8WU39 189 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 SLC13A3Q8WWT9 602 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 TM4SF19Q96DZ7 209 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 MVB12AQ96EY5 273 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ZNF304Q9HCX3 659 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 OPTCQ9UBM4 332 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CDC14AQ9UNH5 594 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 MAU2Q9Y6X3 613 aa15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 MDC1Q14676 2089 aaKnown RBP15.5■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 FER1L5A0AVI2 2057 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CDC14CA4D256 554 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 SMIM23A6NLE4 172 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PRPF4O43172 522 aaKnown RBP eCLIP15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 NDUFS4O43181 175 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 H2AFYO75367 372 aaKnown RBP15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ITGB2P05107 769 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 NUDT17P0C025 328 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CXCR2P25025 360 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 AHRP35869 848 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 IL10RAQ13651 578 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 FAM53BQ14153 422 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 SLBPQ14493 270 aaKnown RBP eCLIP15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 RASA2Q15283 850 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 RBBP5Q15291 538 aaKnown RBP15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 UGT8Q16880 541 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 TMEM214Q6NUQ4 689 aaKnown RBP15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 OVCH1Q7RTY7 1134 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 LCA5Q86VQ0 697 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 KRT78Q8N1N4 520 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 TTC9Q92623 222 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 UBL7Q96S82 380 aaPredicted RBP15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 MACROD1Q9BQ69 325 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 MRPL57Q9BQC6 102 aaKnown RBP15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 DRC3Q9H069 523 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 MRPL46Q9H2W6 279 aaKnown RBP15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 EHD1Q9H4M9 534 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 GEMIN8Q9NWZ8 242 aaKnown RBP15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ZFP69BQ9UJL9 534 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 RAB21Q9UL25 225 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 TMCO1Q9UM00 188 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CACNA1BQ00975 2339 aa15.49■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CFAP47Q6ZTR5 3102 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 GOLGA8RI6L899 631 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ERVH48-1M5A8F1 160 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms