RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 OR1F1O43749 312 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 NRP2O60462 931 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 CTSVO60911 334 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 FTH1P19P0C7X4 201 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 MSL3P1P0C860 447 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 NELFEP18615 380 aaKnown RBP17.84■□□□□ 0.45
MCF2L-230ENST00000491028 CCKBRP32239 447 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 BCL6P41182 706 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 INHBCP55103 352 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 RBBP5Q15291 538 aaKnown RBP17.84■□□□□ 0.45
MCF2L-230ENST00000491028 CCDC157Q569K6 752 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 PHF19Q5T6S3 580 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 CLEC6AQ6EIG7 209 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 D2HGDHQ8N465 521 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 DNAJC22Q8N4W6 341 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 USP7Q93009 1102 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 CHMP6Q96FZ7 201 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 CCT7Q99832 543 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 ZFP69BQ9UJL9 534 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 ADAM21Q9UKJ8 722 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 ZNF490Q9ULM2 529 aaPredicted RBP17.84■□□□□ 0.45
MCF2L-230ENST00000491028 TIMM22Q9Y584 194 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 AP1M2Q9Y6Q5 423 aa17.84■□□□□ 0.45
MCF2L-230ENST00000491028 SPAARA0A1B0GVQ0 90 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 SERTM1A2A2V5 107 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 ANKDD1BA6NHY2 528 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 A8MU76 341 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 TMEM233B4DJY2 109 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 TMX2-CTNND1H3BSU7 103 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 MANBAO00462 879 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 ULK1O75385 1050 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 PCNAP12004 261 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 PIK3CBP42338 1070 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 SEPHS1P49903 392 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 NOVA1P51513 510 aaKnown RBP17.83■□□□□ 0.44
MCF2L-230ENST00000491028 PDX1P52945 283 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 UGT3A2Q3SY77 523 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 FBXO42Q6P3S6 717 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 PLD3Q8IV08 490 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 WDR75Q8IWA0 830 aaKnown RBP17.83■□□□□ 0.44
MCF2L-230ENST00000491028 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.83■□□□□ 0.44
MCF2L-230ENST00000491028 ANKRD53Q8N9V6 530 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 TRPV3Q8NET8 790 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 TWIST2Q8WVJ9 160 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 SELENOMQ8WWX9 145 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 OR2A5Q96R48 311 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 RTKNQ9BST9 563 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 FAM60AQ9NP50 221 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 PFDN4Q9NQP4 134 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 PNPOQ9NVS9 261 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 VTI1BQ9UEU0 232 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 PPT2Q9UMR5 302 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 PLCL2Q9UPR0 1127 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 FIS1Q9Y3D6 152 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 DNAJC15Q9Y5T4 150 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 PCNX2A6NKB5 2137 aa17.83■□□□□ 0.44
MCF2L-230ENST00000491028 A0A0J9YVX5 310 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 SRRM3A6NNA2 597 aaPredicted RBP17.82■□□□□ 0.44
MCF2L-230ENST00000491028 FOXE1O00358 373 aaPredicted RBP17.82■□□□□ 0.44
MCF2L-230ENST00000491028 HDAC3O15379 428 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 LCMT2O60294 686 aaKnown RBP17.82■□□□□ 0.44
MCF2L-230ENST00000491028 PRAMEF10O60809 474 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 CLEC3AO75596 197 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 TGDSO95455 350 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 HSD3B1P14060 373 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 HSD3B2P26439 372 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 GABRA4P48169 554 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 HTR6P50406 440 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 SIM1P81133 766 aaPredicted RBP17.82■□□□□ 0.44
MCF2L-230ENST00000491028 CYP4F3Q08477 520 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 CSTF3Q12996 717 aaKnown RBP17.82■□□□□ 0.44
MCF2L-230ENST00000491028 CYB5D1Q6P9G0 228 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 DHRS13Q6UX07 377 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 B3GNT8Q7Z7M8 397 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 SLCO6A1Q86UG4 719 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 LRRC34Q8IZ02 419 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 HUS1BQ8NHY5 278 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 ZNF473Q8WTR7 871 aaKnown RBP17.82■□□□□ 0.44
MCF2L-230ENST00000491028 RERGQ96A58 199 aaPredicted RBP17.82■□□□□ 0.44
MCF2L-230ENST00000491028 PRR11Q96HE9 360 aaPredicted RBP17.82■□□□□ 0.44
MCF2L-230ENST00000491028 DEPDC7Q96QD5 511 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 BRF2Q9HAW0 419 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 FGFR1OP2Q9NVK5 253 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 PSD3Q9NYI0 1048 aa17.82■□□□□ 0.44
MCF2L-230ENST00000491028 MARCOQ9UEW3 520 aaPredicted RBP17.82■□□□□ 0.44
MCF2L-230ENST00000491028 MDC1Q14676 2089 aaKnown RBP17.82■□□□□ 0.44
MCF2L-230ENST00000491028 SRPX2O60687 465 aaPredicted RBP17.81■□□□□ 0.44
MCF2L-230ENST00000491028 SHOX2O60902 331 aaPredicted RBP17.81■□□□□ 0.44
MCF2L-230ENST00000491028 MT-CO3P00414 261 aa17.81■□□□□ 0.44
MCF2L-230ENST00000491028 PDYNP01213 254 aa17.81■□□□□ 0.44
MCF2L-230ENST00000491028 KITP10721 976 aa17.81■□□□□ 0.44
MCF2L-230ENST00000491028 SERPINB3P29508 390 aa17.81■□□□□ 0.44
MCF2L-230ENST00000491028 CSTF2P33240 577 aaKnown RBP eCLIP17.81■□□□□ 0.44
MCF2L-230ENST00000491028 ACY1Q03154 408 aa17.81■□□□□ 0.44
MCF2L-230ENST00000491028 TCHHL1Q5QJ38 904 aaPredicted RBP17.81■□□□□ 0.44
MCF2L-230ENST00000491028 ASPGQ86U10 573 aa17.81■□□□□ 0.44
MCF2L-230ENST00000491028 CACTIN-AS1Q8N1I8 211 aa17.81■□□□□ 0.44
MCF2L-230ENST00000491028 ZNF655Q8N720 491 aaPredicted RBP17.81■□□□□ 0.44
MCF2L-230ENST00000491028 GBP7Q8N8V2 638 aaPredicted RBP17.81■□□□□ 0.44
MCF2L-230ENST00000491028 RCBTB1Q8NDN9 531 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms