RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 SPATA22Q8NHS9 363 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 LINC01560Q8TB33 94 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 FAM71BQ8TC56 605 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 ZNF398Q8TD17 642 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 PERPQ96FX8 193 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 ZFYVE21Q9BQ24 234 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 PLCD4Q9BRC7 762 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 VN1R1Q9GZP7 353 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 ATG10Q9H0Y0 220 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 SLC25A51Q9H1U9 297 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 TRABDQ9H4I3 376 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 SYNPO2LQ9H987 977 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 MMP25Q9NPA2 562 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 MKKSQ9NPJ1 570 aaPredicted RBP6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 LUC7LQ9NQ29 371 aaKnown RBP6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 PARVAQ9NVD7 372 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 B4GALT7Q9UBV7 327 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 PLAGL1Q9UM63 463 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 RAI1Q7Z5J4 1906 aaPredicted RBP6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 DYSFO75923 2080 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 TUBAL3A6NHL2 446 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 TGFBR3LH3BV60 316 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 TRHRP34981 398 aaPredicted RBP6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 KLK7P49862 253 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 SLC25A11Q02978 314 aaKnown RBP6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 PTPRCAPQ14761 206 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 SYT16Q17RD7 645 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 RIPPLY2Q5TAB7 128 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 ZNF585AQ6P3V2 769 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 POMZP3Q6PJE2 187 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 RNF44Q7L0R7 432 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 SLC13A5Q86YT5 568 aaPredicted RBP6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 TBC1D21Q8IYX1 336 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 ARHGEF39Q8N4T4 335 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 NAXEQ8NCW5 288 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 OR5K2Q8NHB8 316 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 M1APQ8TC57 530 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 PIGTQ969N2 578 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 MVB12AQ96EY5 273 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 SYT11Q9BT88 431 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 DEFB127Q9H1M4 99 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 ZDHHC11Q9H8X9 412 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 ZC3H7BQ9UGR2 993 aaKnown RBP6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 ASF1AQ9Y294 204 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 KLK4Q9Y5K2 254 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 NPFFR2Q9Y5X5 522 aa6.65□□□□□ -1.34
PDLIM1-203ENST00000490391 MED12Q93074 2177 aa6.65□□□□□ -1.35
PDLIM1-203ENST00000490391 FREM1Q5H8C1 2179 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 IGLV3-16A0A075B6K0 115 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 A0A087X1B8 175 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 LOC285095A0A1B0GVY8 99 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 OR14I1A6ND48 311 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 FOXS1O43638 330 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 PEX1O43933 1283 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 DNAJB6O75190 326 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 AP2A1O95782 977 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 FAM157CP0CG43 387 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 TPP2P29144 1249 aaPredicted RBP6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 CYB561P49447 251 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 ITGA8P53708 1063 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 POLR2FP61218 127 aaKnown RBP6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 XIAPP98170 497 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 PPIDQ08752 370 aaKnown RBP6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 DPYSL3Q14195 570 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 GRB7Q14451 532 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 EXT1Q16394 746 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 CHRFAM7AQ494W8 412 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 CCDC122Q5T0U0 273 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 C10orf62Q5T681 223 aaPredicted RBP6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 BEND4Q6ZU67 534 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 SEM1Q6ZVN7 128 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 RPS19BP1Q86WX3 136 aaKnown RBP6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 SLC5A8Q8N695 610 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 PQLC3Q8N755 202 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 MAPK1IP1LQ8NDC0 245 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 ROBO4Q8WZ75 1007 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 SMPDL3BQ92485 455 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 SMC6Q96SB8 1091 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 CYTH2Q99418 400 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 AGPAT1Q99943 283 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 CDCP1Q9H5V8 836 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 ASB8Q9H765 288 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 POLG2Q9UHN1 485 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 HOOK1Q9UJC3 728 aaKnown RBP6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 CDC14AQ9UNH5 594 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 TDRKHQ9Y2W6 561 aaKnown RBP6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 KLF13Q9Y2Y9 288 aaPredicted RBP6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 LIPGQ9Y5X9 500 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 HEATR5AQ86XA9 2040 aa6.64□□□□□ -1.35
PDLIM1-203ENST00000490391 A0A0J9YVX5 310 aa6.63□□□□□ -1.35
PDLIM1-203ENST00000490391 A0A1B0GVC2 190 aa6.63□□□□□ -1.35
PDLIM1-203ENST00000490391 OR2W5A6NFC9 320 aa6.63□□□□□ -1.35
PDLIM1-203ENST00000490391 ARHGEF33A8MVX0 844 aa6.63□□□□□ -1.35
PDLIM1-203ENST00000490391 TARM1B6A8C7 271 aa6.63□□□□□ -1.35
PDLIM1-203ENST00000490391 KLRC4-KLRK1H3BQV0 150 aa6.63□□□□□ -1.35
PDLIM1-203ENST00000490391 NDC80O14777 642 aa6.63□□□□□ -1.35
PDLIM1-203ENST00000490391 BCKDKO14874 412 aa6.63□□□□□ -1.35
PDLIM1-203ENST00000490391 PRPF4O43172 522 aaKnown RBP eCLIP6.63□□□□□ -1.35
PDLIM1-203ENST00000490391 TLX2O43763 284 aaPredicted RBP6.63□□□□□ -1.35
PDLIM1-203ENST00000490391 WDR1O75083 606 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms