RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 PARP9Q8IXQ6 854 aa20.02■□□□□ 0.79
SND1-214ENST00000489417 TTLQ8NG68 377 aa20.02■□□□□ 0.79
SND1-214ENST00000489417 OR2I1PQ8NGU4 316 aa20.02■□□□□ 0.79
SND1-214ENST00000489417 OR4C6Q8NH72 309 aa20.02■□□□□ 0.79
SND1-214ENST00000489417 METTL2AQ96IZ6 378 aaKnown RBP20.02■□□□□ 0.79
SND1-214ENST00000489417 SARGQ9BW04 601 aa20.02■□□□□ 0.79
SND1-214ENST00000489417 BRINP2Q9C0B6 783 aa20.02■□□□□ 0.79
SND1-214ENST00000489417 SMOC1Q9H4F8 434 aa20.02■□□□□ 0.79
SND1-214ENST00000489417 SDR39U1Q9NRG7 319 aaPredicted RBP20.02■□□□□ 0.79
SND1-214ENST00000489417 TMED5Q9Y3A6 229 aa20.02■□□□□ 0.79
SND1-214ENST00000489417 KLK4Q9Y5K2 254 aa20.02■□□□□ 0.79
SND1-214ENST00000489417 A0A0C4DFX4 3053 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 OR2A25A4D2G3 310 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 TRIM38O00635 465 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 SH3BGRLO75368 114 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 ATP5HO75947 161 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 TGFB1P01137 390 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 ESRRAP11474 423 aaPredicted RBP20.01■□□□□ 0.79
SND1-214ENST00000489417 GLB1P16278 677 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 CALB2P22676 271 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 PTX3P26022 381 aaPredicted RBP20.01■□□□□ 0.79
SND1-214ENST00000489417 GSTM2P28161 218 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 MAPK1P28482 360 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 LSSP48449 732 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 PPP1CAP62136 330 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 HERC3Q15034 1050 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 CCDC6Q16204 474 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 AGKQ53H12 422 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 CACHD1Q5VU97 1274 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 MFSD9Q8NBP5 474 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 CMTM5Q96DZ9 223 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 GTPBP2Q9BX10 602 aaKnown RBP20.01■□□□□ 0.79
SND1-214ENST00000489417 COL25A1Q9BXS0 654 aaPredicted RBP20.01■□□□□ 0.79
SND1-214ENST00000489417 ABCG4Q9H172 646 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 EVA1BQ9NVM1 165 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 PADI4Q9UM07 663 aa20.01■□□□□ 0.79
SND1-214ENST00000489417 CACNA1EQ15878 2313 aa20■□□□□ 0.79
SND1-214ENST00000489417 SDK1Q7Z5N4 2213 aa20■□□□□ 0.79
SND1-214ENST00000489417 KHNYNO15037 678 aaKnown RBP20■□□□□ 0.79
SND1-214ENST00000489417 CLEC3AO75596 197 aa20■□□□□ 0.79
SND1-214ENST00000489417 UNC5CO95185 931 aa20■□□□□ 0.79
SND1-214ENST00000489417 COX4I1P13073 169 aa20■□□□□ 0.79
SND1-214ENST00000489417 ACPPP15309 386 aa20■□□□□ 0.79
SND1-214ENST00000489417 AHRP35869 848 aa20■□□□□ 0.79
SND1-214ENST00000489417 ACADVLP49748 655 aa20■□□□□ 0.79
SND1-214ENST00000489417 NME5P56597 212 aa20■□□□□ 0.79
SND1-214ENST00000489417 ACSM2AQ08AH3 577 aa20■□□□□ 0.79
SND1-214ENST00000489417 ACSM2BQ68CK6 577 aa20■□□□□ 0.79
SND1-214ENST00000489417 FCRL6Q6DN72 434 aa20■□□□□ 0.79
SND1-214ENST00000489417 PAOXQ6QHF9 649 aa20■□□□□ 0.79
SND1-214ENST00000489417 CYP20A1Q6UW02 462 aa20■□□□□ 0.79
SND1-214ENST00000489417 POU5F2Q8N7G0 328 aa20■□□□□ 0.79
SND1-214ENST00000489417 ZUFSPQ96AP4 578 aa20■□□□□ 0.79
SND1-214ENST00000489417 FCRL1Q96LA6 429 aa20■□□□□ 0.79
SND1-214ENST00000489417 APOLD1Q96LR9 279 aa20■□□□□ 0.79
SND1-214ENST00000489417 PPM1MQ96MI6 270 aa20■□□□□ 0.79
SND1-214ENST00000489417 MS4A8Q9BY19 250 aa20■□□□□ 0.79
SND1-214ENST00000489417 OR51B5Q9H339 312 aa20■□□□□ 0.79
SND1-214ENST00000489417 RUVBL1Q9Y265 456 aaKnown RBP20■□□□□ 0.79
SND1-214ENST00000489417 KNL1Q8NG31 2342 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 THRAP10827 490 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 G6PDP11413 515 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 MYF5P13349 255 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 HOXB3P14651 431 aaPredicted RBP19.99■□□□□ 0.79
SND1-214ENST00000489417 PVRP15151 417 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 EZRP15311 586 aaKnown RBP19.99■□□□□ 0.79
SND1-214ENST00000489417 ENGP17813 658 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 PPM1FP49593 454 aaPredicted RBP19.99■□□□□ 0.79
SND1-214ENST00000489417 RPS15AP62244 130 aaKnown RBP19.99■□□□□ 0.79
SND1-214ENST00000489417 TBL3Q12788 808 aaKnown RBP19.99■□□□□ 0.79
SND1-214ENST00000489417 CUL3Q13618 768 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 NR1D2Q14995 579 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 NR0B2Q15466 257 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 MAPRE2Q15555 327 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 SPIN4Q56A73 249 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 LAIR1Q6GTX8 287 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 IRGCQ6NXR0 463 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 GK5Q6ZS86 529 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 SNX32Q86XE0 403 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 LIX1Q8N485 282 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 CHTF18Q8WVB6 975 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 MRPL1Q9BYD6 325 aaKnown RBP19.99■□□□□ 0.79
SND1-214ENST00000489417 KLHL25Q9H0H3 589 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 SEMA6CQ9H3T2 930 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 EPB41L1Q9H4G0 881 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 ZIM2Q9NZV7 527 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 PCDHGA4Q9Y5G9 962 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 AP1M2Q9Y6Q5 423 aa19.99■□□□□ 0.79
SND1-214ENST00000489417 ADAMTS9Q9P2N4 1935 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 SIGLEC6O43699 453 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 PCDHGA12O60330 932 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 HNRNPCL1O60812 293 aaKnown RBP19.98■□□□□ 0.79
SND1-214ENST00000489417 MYO1DO94832 1006 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 PRPS2P11908 318 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 BCKDHAP12694 445 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 CD1EP15812 388 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 CDH3P22223 829 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 ALDH4A1P30038 563 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 GPR3P46089 330 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 HNRNPH2P55795 449 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms