RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 FFAR3O14843 346 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 INPP4BO15327 924 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 GPR42O15529 346 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 TSPAN6O43657 245 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 AHCYL1O43865 530 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 TIPRLO75663 272 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 RECQL5O94762 991 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 H6PDO95479 791 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 RPN2P04844 631 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 FESP07332 822 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 ZCCHC18P0CG32 403 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 ADRB3P13945 408 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 AMD1P17707 334 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 DDX5P17844 614 aaKnown RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 DRD1P21728 446 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 MYF6P23409 242 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 SERPINB1P30740 379 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 KIR3DL1P43629 444 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 GSTM5P46439 218 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 SLC6A11P48066 632 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 PHEXP78562 749 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 CHRNB3Q05901 458 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 ABHD18Q0P651 414 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 CHIT1Q13231 466 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 PTGR1Q14914 329 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 ARHGAP19Q14CB8 494 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 PON2Q15165 354 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 CPSF6Q16630 551 aaKnown RBP eCLIP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 FNDC3BQ53EP0 1204 aaKnown RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 LCE2CQ5TA81 110 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 KRT80Q6KB66 452 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 CAPN13Q6MZZ7 669 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 HMBOX1Q6NT76 420 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 NEK5Q6P3R8 708 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 GALNT18Q6P9A2 607 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 AGTRAPQ6RW13 159 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 ADAMTSL4Q6UY14 1074 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 SERPINA11Q86U17 422 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 THOC6Q86W42 341 aaKnown RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 CALHM3Q86XJ0 350 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 VRK3Q8IV63 474 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 MAML2Q8IZL2 1156 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 NAT16Q8N8M0 369 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 DCBLD1Q8N8Z6 715 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 TERB1Q8NA31 727 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 ZNF548Q8NEK5 533 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 VPS37AQ8NEZ2 397 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 WDR20Q8TBZ3 569 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 SETD7Q8WTS6 366 aaKnown RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 CYB5D2Q8WUJ1 264 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 ZFAND2BQ8WV99 257 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 NELL1Q92832 810 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 FAM122AQ96E09 287 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 C11orf24Q96F05 449 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 REXO5Q96IC2 774 aaKnown RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 ZNF583Q96ND8 569 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 TSC22D3Q99576 134 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 PRPF18Q99633 342 aaKnown RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 CIB1Q99828 191 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 PITHD1Q9GZP4 211 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 CHRDQ9H2X0 955 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 RPF2Q9H7B2 306 aaKnown RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 KAT8Q9H7Z6 458 aaKnown RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 STOX2Q9P2F5 926 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 EGFL7Q9UHF1 273 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 AURKCQ9UQB9 309 aa8.17□□□□□ -1.1
VTI1A-207ENST00000489357 WBP11Q9Y2W2 641 aaKnown RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 PTPRZ1P23471 2315 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-207ENST00000489357 RNF103-CHMP3A0A140T963 221 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 ARHGAP10A1A4S6 786 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 TRIM64A6NGJ6 449 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 OR2AG2A6NM03 316 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 EVPLLA8MZ36 301 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 CHURC1-FNTBB4DL54 471 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 GSTA4O15217 222 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 CLOCKO15516 846 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 EFSO43281 561 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 KCNJ13O60928 360 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 C1orf105O95561 183 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 ABCB1P08183 1280 aaPredicted RBP8.16□□□□□ -1.1
VTI1A-207ENST00000489357 TDGF1P13385 188 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 HOXB9P17482 250 aaPredicted RBP8.16□□□□□ -1.1
VTI1A-207ENST00000489357 SDC1P18827 310 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 HRH2P25021 359 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 HOXA6P31267 233 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 TTKP33981 857 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 PIK3CBP42338 1070 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 HALP42357 657 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 TNFRSF4P43489 277 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 KIR2DL1P43626 348 aaPredicted RBP8.16□□□□□ -1.1
VTI1A-207ENST00000489357 RXRGP48443 463 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 RPS6KA3P51812 740 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 ATXN3P54252 364 aaPredicted RBP8.16□□□□□ -1.1
VTI1A-207ENST00000489357 HMGCS1Q01581 520 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 NHLH1Q02575 133 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 ACSM2AQ08AH3 577 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 APOFQ13790 326 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 ENPP2Q13822 863 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 ZXDCQ2QGD7 858 aaPredicted RBP8.16□□□□□ -1.1
VTI1A-207ENST00000489357 FBXO43Q4G163 708 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms