RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 OR3A3P47888 321 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 OR3A2P47893 321 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 CLCNKAP51800 687 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 SDR16C5Q8N3Y7 309 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 MTMR14Q8NCE2 650 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 KIAA1191Q96A73 305 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 SUSD3Q96L08 255 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 CENPMQ9NSP4 180 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 ADAMTS6Q9UKP5 1117 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 SPEF1Q9Y4P9 236 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 YIPF1Q9Y548 306 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 SNAP29O95721 258 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 MAP2K4P45985 399 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 JAG1P78504 1218 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 ZNF404Q494X3 552 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 RNF130Q86XS8 419 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 SAMD14Q8IZD0 417 aaPredicted RBP17.1■□□□□ 0.33
NPHP4-209ENST00000489180 CMTM7Q96FZ5 175 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 AURKBQ96GD4 344 aaPredicted RBP17.1■□□□□ 0.33
NPHP4-209ENST00000489180 BEX2Q9BXY8 128 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 BEX1Q9HBH7 125 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 SIX4Q9UIU6 781 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 CMAHPQ9Y471 501 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 C3P01024 1663 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 AURKAO14965 403 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 GATBO75879 557 aaKnown RBP17.1■□□□□ 0.33
NPHP4-209ENST00000489180 ZNF20P17024 532 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 GKP32189 559 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 FBXO43Q4G163 708 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 GALNT7Q86SF2 657 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 YIPF7Q8N8F6 280 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 BPIFB1Q8TDL5 484 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 NCSTNQ92542 709 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 MUS81Q96NY9 551 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 NSUN5Q96P11 429 aaKnown RBP17.1■□□□□ 0.33
NPHP4-209ENST00000489180 ENTPD6O75354 484 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 YES1P07947 543 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 CHAF1BQ13112 559 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 CYBRD1Q53TN4 286 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 ZNF280BQ86YH2 543 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 PRICKLE1Q96MT3 831 aaPredicted RBP17.1■□□□□ 0.33
NPHP4-209ENST00000489180 TM9SF2Q99805 663 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 MAPKAP1Q9BPZ7 522 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 TRPV4Q9HBA0 871 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 GDAP2Q9NXN4 497 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 PCDHGA12O60330 932 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 APOC1P02654 83 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 SH3D19Q5HYK7 790 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 KIAA1614Q5VZ46 1190 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 FOXRED2Q8IWF2 684 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 PTGDR2Q9Y5Y4 395 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 DUOX1Q9NRD9 1551 aa17.1■□□□□ 0.33
NPHP4-209ENST00000489180 A0A1B0GVT2 93 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 KANTRA0A1W2PQU2 76 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 ARVCFO00192 962 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 GSTM3P21266 225 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 MLLT6P55198 1093 aaPredicted RBP17.09■□□□□ 0.33
NPHP4-209ENST00000489180 FAM129BQ96TA1 746 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 SLC28A3Q9HAS3 691 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 HPF1Q9NWY4 346 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 LYARQ9NX58 379 aaKnown RBP17.09■□□□□ 0.33
NPHP4-209ENST00000489180 ZNF208O43345 1280 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 CD72P21854 359 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 TUBA4AP68366 448 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 EMX2Q04743 252 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 ADAM15Q13444 863 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 UGT8Q16880 541 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 AMZ1Q400G9 498 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 C2orf27AQ580R0 203 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 ALG1LQ6GMV1 187 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 TCEAL6Q6IPX3 200 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 SPATC1Q76KD6 591 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 OR2AP1Q8NGE2 309 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 SLC30A2Q9BRI3 323 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 ZSCAN5AQ9BUG6 496 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 CSF2P04141 144 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 CCKBRP32239 447 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 SUSD1Q6UWL2 747 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 NPAS3Q8IXF0 933 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 LSM14AQ8ND56 463 aaKnown RBP17.09■□□□□ 0.33
NPHP4-209ENST00000489180 TMEM80Q96HE8 168 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 RAB11FIP5Q9BXF6 653 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 ANKHQ9HCJ1 492 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 MS4A12Q9NXJ0 267 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 GMPRP36959 345 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 ACADVLP49748 655 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 MEF2AQ02078 507 aaPredicted RBP17.09■□□□□ 0.33
NPHP4-209ENST00000489180 ABHD13Q7L211 337 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 C7orf43Q8WVR3 580 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 CCDC120Q96HB5 630 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 CD244Q9BZW8 370 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 DPAGT1Q9H3H5 408 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 EHD1Q9H4M9 534 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 TM9SF3Q9HD45 589 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 TIGARQ9NQ88 270 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 MGAT4AQ9UM21 535 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 TMEM98Q9Y2Y6 226 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 TMED5Q9Y3A6 229 aa17.09■□□□□ 0.33
NPHP4-209ENST00000489180 TACSTD2P09758 323 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 ARSFP54793 590 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms