RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 TBC1D10AQ9BXI6 508 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 MRPL1Q9BYD6 325 aaKnown RBP9.61□□□□□ -0.87
USP11-211ENST00000489111 DPY30Q9C005 99 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 RHBGQ9H310 441 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 NDE1Q9NXR1 346 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 AHSPQ9NZD4 102 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 RAB23Q9ULC3 237 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 PPT2Q9UMR5 302 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 RRP15Q9Y3B9 282 aaKnown RBP9.61□□□□□ -0.87
USP11-211ENST00000489111 TECTAO75443 2155 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 PLXND1Q9Y4D7 1925 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 BDP1A6H8Y1 2624 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 A0A1B0GTQ1 180 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 GNG14A0A1W2PPG7 69 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 FAM86C2PA6NEL3 165 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 SAP18O00422 153 aaKnown RBP9.6□□□□□ -0.87
USP11-211ENST00000489111 AIM2O14862 343 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 PPM1DO15297 605 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 NDUFS4O43181 175 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 CLEC3AO75596 197 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 SEMA3DO95025 777 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 ETHE1O95571 254 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 TGFB1P01137 390 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 SYPP08247 313 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 ANXA4P09525 319 aaPredicted RBP9.6□□□□□ -0.87
USP11-211ENST00000489111 TYRP1P17643 537 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 MAGP20916 626 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 JAK1P23458 1154 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 TIA1P31483 386 aaKnown RBP eCLIP9.6□□□□□ -0.87
USP11-211ENST00000489111 BCL6P41182 706 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 GRIA3P42263 894 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 POLR2JP52435 117 aaKnown RBP9.6□□□□□ -0.87
USP11-211ENST00000489111 CLNS1AP54105 237 aaKnown RBP9.6□□□□□ -0.87
USP11-211ENST00000489111 EPHA4P54764 986 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 UFM1P61960 85 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 CYP4F3Q08477 520 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 BNIP3Q12983 259 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 ART3Q13508 389 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 RCAN2Q14206 197 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 PTGR1Q14914 329 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 LPAL2Q16609 132 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 HLA-BQ31612 363 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 TIGD2Q4W5G0 525 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 TRIM61Q5EBN2 209 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 KHDRBS2Q5VWX1 349 aaKnown RBP9.6□□□□□ -0.87
USP11-211ENST00000489111 ZNF425Q6IV72 752 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 NOXRED1Q6NXP6 359 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 IRGCQ6NXR0 463 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 C16orf89Q6UX73 402 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 RINLQ6ZS11 566 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 ASRGL1Q7L266 308 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 PAGE2Q7Z2X7 111 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 COMMD6Q7Z4G1 85 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 VN1R5Q7Z5H4 357 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 PAQR7Q86WK9 346 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 C17orf82Q86X59 251 aaPredicted RBP9.6□□□□□ -0.87
USP11-211ENST00000489111 ARHGAP24Q8N264 748 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 SLC25A45Q8N413 288 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 ANKRD53Q8N9V6 530 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 GLB1L3Q8NCI6 653 aaPredicted RBP9.6□□□□□ -0.87
USP11-211ENST00000489111 RBM15BQ8NDT2 890 aaKnown RBP9.6□□□□□ -0.87
USP11-211ENST00000489111 TRPV3Q8NET8 790 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 CLHC1Q8NHS4 586 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 STARD8Q92502 1023 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 RSC1A1Q92681 617 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 SLC7A6OSQ96CW6 309 aaPredicted RBP9.6□□□□□ -0.87
USP11-211ENST00000489111 QRFPRQ96P65 431 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 BTBD10Q9BSF8 475 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 DUSP23Q9BVJ7 150 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 EBPLQ9BY08 206 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 MS4A8Q9BY19 250 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 OR51B5Q9H339 312 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 GAREM1Q9H706 876 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 EFCAB1Q9HAE3 211 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 FSCN3Q9NQT6 498 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 NLGN3Q9NZ94 848 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 POMT2Q9UKY4 750 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 SLC6A14Q9UN76 642 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 DLGAP4Q9Y2H0 992 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 KLHL20Q9Y2M5 609 aa9.6□□□□□ -0.87
USP11-211ENST00000489111 ARHGAP10A1A4S6 786 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 DYTNA2CJ06 578 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 OR2A25A4D2G3 310 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 CCDC154A6NI56 674 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 C9JVG2 144 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 H0YHG0 523 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 MRASO14807 208 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 CFLARO15519 480 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 GALR2O43603 387 aaPredicted RBP9.59□□□□□ -0.87
USP11-211ENST00000489111 NUDT21O43809 227 aaKnown RBP9.59□□□□□ -0.87
USP11-211ENST00000489111 PCDH7O60245 1069 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 KRT16P08779 473 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 SDC1P18827 310 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 CDH3P22223 829 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 AHRP35869 848 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 HPCAL1P37235 193 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 ASMTP46597 345 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 CORO7P57737 925 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 RGS1Q08116 209 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 TGM3Q08188 693 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms