RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 IL12RB1P42701 662 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 IL2P60568 153 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 SPANXN4Q5MJ08 99 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 CTSL3PQ5NE16 218 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 GALNT6Q8NCL4 622 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 DNAJB8Q8NHS0 232 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 COL21A1Q96P44 957 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 DEFB118Q96PH6 123 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 RAD9AQ99638 391 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 MYOCQ99972 504 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 KCNS3Q9BQ31 491 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 DPY30Q9C005 99 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 ROGDIQ9GZN7 287 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 SPASTQ9UBP0 616 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 KLHL20Q9Y2M5 609 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 SNX8Q9Y5X2 465 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 COMMD10Q9Y6G5 202 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 TRBV5-3A0A0A0MS03 114 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 A0A0X1KG70 313 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 A0A1W2PQ72 361 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 C12orf71A8MTZ7 269 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 E5RI56 91 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 INSIG1O15503 277 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 ARHGEF9O43307 516 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 CPNE3O75131 537 aaKnown RBP13.76□□□□□ -0.21
RER1-207ENST00000488353 ZNF780AO75290 641 aaPredicted RBP13.76□□□□□ -0.21
RER1-207ENST00000488353 CNPP09543 421 aaKnown RBP13.76□□□□□ -0.21
RER1-207ENST00000488353 CD72P21854 359 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 SLC19A1P41440 591 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 GZMMP51124 257 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 CAMK2GQ13555 558 aaPredicted RBP13.76□□□□□ -0.21
RER1-207ENST00000488353 TAF1AQ15573 450 aaPredicted RBP13.76□□□□□ -0.21
RER1-207ENST00000488353 TIMM50Q3ZCQ8 353 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 TOR1AIP1Q5JTV8 583 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 PLPP6Q8IY26 295 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 CRIPAKQ8N1N5 446 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 LSMEM1Q8N8F7 131 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 ZFAND1Q8TCF1 268 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 CD200R1Q8TD46 325 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 SNAPC3Q92966 411 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 MAP6Q96JE9 813 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 VPS35Q96QK1 796 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 OR52E6Q96RD3 313 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 MGME1Q9BQP7 344 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 ASAH2Q9NR71 780 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 OLA1Q9NTK5 396 aaKnown RBP13.76□□□□□ -0.21
RER1-207ENST00000488353 NUFIP1Q9UHK0 495 aaKnown RBP13.76□□□□□ -0.21
RER1-207ENST00000488353 ZMYM5Q9UJ78 669 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 SAMHD1Q9Y3Z3 626 aaKnown RBP13.76□□□□□ -0.21
RER1-207ENST00000488353 PCDHGA6Q9Y5G7 932 aa13.76□□□□□ -0.21
RER1-207ENST00000488353 SLC38A8A6NNN8 435 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 CBX4O00257 560 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 SHOXO15266 292 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 ERN1O75460 977 aaKnown RBP13.75□□□□□ -0.21
RER1-207ENST00000488353 IGLV3-27P01718 113 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 OR1D2P34982 312 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 RPL38P63173 70 aaKnown RBP13.75□□□□□ -0.21
RER1-207ENST00000488353 MAD2L1Q13257 205 aaPredicted RBP13.75□□□□□ -0.21
RER1-207ENST00000488353 GTDC1Q4AE62 458 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 LIX1LQ8IVB5 337 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 DNAJC22Q8N4W6 341 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 GGHQ92820 318 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 SPATA17Q96L03 361 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 FKBP14Q9NWM8 211 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 MUTYHQ9UIF7 546 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 CHD5Q8TDI0 1954 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 CCDC182A6NF36 153 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 E9PQ18 207 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 FKTNO75072 461 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 FABP3P05413 133 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 ADORA3P0DMS8 318 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 POLR2CP19387 275 aaPredicted RBP13.75□□□□□ -0.21
RER1-207ENST00000488353 LPOP22079 712 aaPredicted RBP13.75□□□□□ -0.21
RER1-207ENST00000488353 MLLT3P42568 568 aaPredicted RBP13.75□□□□□ -0.21
RER1-207ENST00000488353 PIK3CGP48736 1102 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 FAPQ12884 760 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 ABRAXAS2Q15018 415 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 INO80DQ53TQ3 878 aaPredicted RBP13.75□□□□□ -0.21
RER1-207ENST00000488353 FAHD1Q6P587 224 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.75□□□□□ -0.21
RER1-207ENST00000488353 ANKS3Q6ZW76 656 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 PLCZ1Q86YW0 608 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 CRELD1Q96HD1 420 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 PSKH2Q96QS6 385 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 AMBNQ9NP70 447 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 RIMKLBQ9ULI2 386 aa13.75□□□□□ -0.21
RER1-207ENST00000488353 CDK2AP1O14519 115 aa13.74□□□□□ -0.21
RER1-207ENST00000488353 RGS5O15539 181 aa13.74□□□□□ -0.21
RER1-207ENST00000488353 GJB5O95377 273 aa13.74□□□□□ -0.21
RER1-207ENST00000488353 VEGFBP49765 207 aa13.74□□□□□ -0.21
RER1-207ENST00000488353 SGSHP51688 502 aa13.74□□□□□ -0.21
RER1-207ENST00000488353 AP2S1P53680 142 aaPredicted RBP13.74□□□□□ -0.21
RER1-207ENST00000488353 CD83Q01151 205 aa13.74□□□□□ -0.21
RER1-207ENST00000488353 SCN1BQ07699 218 aa13.74□□□□□ -0.21
RER1-207ENST00000488353 ABHD18Q0P651 414 aa13.74□□□□□ -0.21
RER1-207ENST00000488353 LINGO4Q6UY18 593 aa13.74□□□□□ -0.21
RER1-207ENST00000488353 C16orf59Q7L2K0 433 aa13.74□□□□□ -0.21
RER1-207ENST00000488353 TMCO2Q7Z6W1 182 aaPredicted RBP13.74□□□□□ -0.21
RER1-207ENST00000488353 ZSWIM9Q86XI8 627 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms