RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 HACD3Q9P035 362 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 ADD3Q9UEY8 706 aaKnown RBP3.03□□□□□ -1.92
SMC4-219ENST00000487747 SPATA31D1Q6ZQQ2 1576 aa3.03□□□□□ -1.92
SMC4-219ENST00000487747 RSF1Q96T23 1441 aaPredicted RBP3.02□□□□□ -1.93
SMC4-219ENST00000487747 IPO8O15397 1037 aaKnown RBP3.02□□□□□ -1.93
SMC4-219ENST00000487747 ZBED4O75132 1171 aa3.02□□□□□ -1.93
SMC4-219ENST00000487747 SH3BGRLO75368 114 aa3.02□□□□□ -1.93
SMC4-219ENST00000487747 CSN3P07498 182 aa3.02□□□□□ -1.93
SMC4-219ENST00000487747 CHRNA3P32297 505 aa3.02□□□□□ -1.93
SMC4-219ENST00000487747 HLCSP50747 726 aa3.02□□□□□ -1.93
SMC4-219ENST00000487747 POLR2LP62875 67 aaKnown RBP3.02□□□□□ -1.93
SMC4-219ENST00000487747 EIF4EBP2Q13542 120 aaPredicted RBP3.02□□□□□ -1.93
SMC4-219ENST00000487747 NONOQ15233 471 aaKnown RBP eCLIP3.02□□□□□ -1.932e-56■■■■■ 142.8
SMC4-219ENST00000487747 NPTX1Q15818 432 aa3.02□□□□□ -1.93
SMC4-219ENST00000487747 DUSP5Q16690 384 aa3.02□□□□□ -1.93
SMC4-219ENST00000487747 HSP90AB4PQ58FF6 505 aa3.02□□□□□ -1.93
SMC4-219ENST00000487747 ATAD3CQ5T2N8 411 aa3.02□□□□□ -1.93
SMC4-219ENST00000487747 RCOR2Q8IZ40 523 aa3.02□□□□□ -1.93
SMC4-219ENST00000487747 NOA1Q8NC60 698 aaKnown RBP3.02□□□□□ -1.93
SMC4-219ENST00000487747 KCNE4Q8WWG9 221 aa3.02□□□□□ -1.93
SMC4-219ENST00000487747 MOB3AQ96BX8 217 aa3.02□□□□□ -1.93
SMC4-219ENST00000487747 TEX12Q9BXU0 123 aa3.02□□□□□ -1.93
SMC4-219ENST00000487747 OCR1Q9BZK8 76 aa3.02□□□□□ -1.93
SMC4-219ENST00000487747 GIMAP4Q9NUV9 329 aa3.02□□□□□ -1.93
SMC4-219ENST00000487747 NAALAD2Q9Y3Q0 740 aa3.02□□□□□ -1.93
SMC4-219ENST00000487747 IGHV3-16A0A0C4DH30 117 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 FAM168BA1KXE4 195 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 TRIM49BA6NDI0 452 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 ZNF749O43361 778 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 CYTIPO60759 359 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 ATP6AP2O75787 350 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 SAT1P21673 171 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 AZGP1P25311 298 aaKnown RBP3.01□□□□□ -1.93
SMC4-219ENST00000487747 LMO2P25791 158 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 BAATQ14032 418 aaPredicted RBP3.01□□□□□ -1.93
SMC4-219ENST00000487747 NTRK2Q16620 822 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 UPP1Q16831 310 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 Q1RN00 199 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 TMEM266Q2M3C6 531 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 ATP1A1-AS1Q5TC04 95 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 CYB5D1Q6P9G0 228 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 CTR9Q6PD62 1173 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 SLC22A15Q8IZD6 547 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 PRPF31Q8WWY3 499 aaKnown RBP3.01□□□□□ -1.93
SMC4-219ENST00000487747 CPNE1Q99829 537 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 RAVER2Q9HCJ3 691 aaKnown RBP3.01□□□□□ -1.93
SMC4-219ENST00000487747 DNAJC4Q9NNZ3 241 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 TBC1D13Q9NVG8 400 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 ABCD2Q9UBJ2 740 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 TBC1D29Q9UFV1 150 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 SLC24A2Q9UI40 661 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 CPSF3Q9UKF6 684 aaKnown RBP3.01□□□□□ -1.93
SMC4-219ENST00000487747 PILRAQ9UKJ1 303 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 IKZF3Q9UKT9 509 aa3.01□□□□□ -1.93
SMC4-219ENST00000487747 A0A087WZ39 114 aa3□□□□□ -1.93
SMC4-219ENST00000487747 hCG_1807616A0A1W2PRN6 198 aa3□□□□□ -1.93
SMC4-219ENST00000487747 K7EQG2 157 aa3□□□□□ -1.93
SMC4-219ENST00000487747 PDHXO00330 501 aa3□□□□□ -1.93
SMC4-219ENST00000487747 HAT1O14929 419 aa3□□□□□ -1.93
SMC4-219ENST00000487747 MAGEB2O15479 319 aa3□□□□□ -1.93
SMC4-219ENST00000487747 SNX3O60493 162 aa3□□□□□ -1.93
SMC4-219ENST00000487747 SAP30O75446 220 aa3□□□□□ -1.93
SMC4-219ENST00000487747 LY6G6DO95868 133 aa3□□□□□ -1.93
SMC4-219ENST00000487747 GSRP00390 522 aa3□□□□□ -1.93
SMC4-219ENST00000487747 ERVK-16P61578 105 aa3□□□□□ -1.93
SMC4-219ENST00000487747 RUNX3Q13761 415 aa3□□□□□ -1.93
SMC4-219ENST00000487747 GORABQ5T7V8 394 aa3□□□□□ -1.93
SMC4-219ENST00000487747 FAM205BPQ63HN1 556 aa3□□□□□ -1.93
SMC4-219ENST00000487747 CPEB2Q7Z5Q1 589 aaKnown RBP3□□□□□ -1.93
SMC4-219ENST00000487747 RASGEF1AQ8N9B8 481 aa3□□□□□ -1.93
SMC4-219ENST00000487747 RPLP0P6Q8NHW5 317 aa3□□□□□ -1.93
SMC4-219ENST00000487747 CHURC1Q8WUH1 139 aa3□□□□□ -1.93
SMC4-219ENST00000487747 ATL1Q8WXF7 558 aa3□□□□□ -1.93
SMC4-219ENST00000487747 C11orf52Q96A22 123 aa3□□□□□ -1.93
SMC4-219ENST00000487747 BTBD9Q96Q07 612 aa3□□□□□ -1.93
SMC4-219ENST00000487747 TAAR6Q96RI8 345 aa3□□□□□ -1.93
SMC4-219ENST00000487747 FEVQ99581 238 aa3□□□□□ -1.93
SMC4-219ENST00000487747 BARD1Q99728 777 aaKnown RBP3□□□□□ -1.93
SMC4-219ENST00000487747 TEX13BQ9BXU2 312 aa3□□□□□ -1.93
SMC4-219ENST00000487747 ANKZF1Q9H8Y5 726 aa3□□□□□ -1.93
SMC4-219ENST00000487747 PDE7BQ9NP56 450 aa3□□□□□ -1.93
SMC4-219ENST00000487747 CLEC5AQ9NY25 188 aa3□□□□□ -1.93
SMC4-219ENST00000487747 MRPS18CQ9Y3D5 142 aaKnown RBP3□□□□□ -1.93
SMC4-219ENST00000487747 K7ENM7 598 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 CREB3O43889 395 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 RPLP0P05388 317 aaKnown RBP2.99□□□□□ -1.93
SMC4-219ENST00000487747 FAM200BP0CF97 657 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 F3P13726 295 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 EPCAMP16422 314 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 RXRGP48443 463 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 ABCE1P61221 599 aaKnown RBP2.99□□□□□ -1.93
SMC4-219ENST00000487747 ACY1Q03154 408 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 VWC2Q2TAL6 325 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 FAM106AQ4KMX7 169 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 TMEM64Q6YI46 380 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 CARM1Q86X55 608 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 ANKRD13CQ8N6S4 541 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 GBP7Q8N8V2 638 aaPredicted RBP2.99□□□□□ -1.93
SMC4-219ENST00000487747 B3GALT6Q96L58 329 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 ABHD1Q96SE0 405 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms