RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 PIK3R1P27986 724 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 SSTR1P30872 391 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 TCF7P36402 384 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 IER3P46695 156 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 SNU13P55769 128 aaKnown RBP3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 CLDN17P56750 224 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 B3GALT5-AS1P59052 145 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 ERVK11-1P61568 191 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 GUCY2DQ02846 1103 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 HLA-BQ31612 363 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 TMEM30BQ3MIR4 351 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 ANKRD20A4Q4UJ75 823 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 C14orf177Q52M58 125 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 ANKRD20A8PQ5CZ79 823 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 ZNF789Q5FWF6 425 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 SLC25A53Q5H9E4 307 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 ANKRD20A2Q5SQ80 823 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 ANKRD20A1Q5TYW2 823 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 ANKRD20A3Q5VUR7 823 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 FAM53AQ6NSI3 398 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 OTOAQ7RTW8 1153 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 MYPOPQ86VE0 399 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 HOGA1Q86XE5 327 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 LACC1Q8IV20 430 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 CLYBLQ8N0X4 340 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 GBP7Q8N8V2 638 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 WDSUB1Q8N9V3 476 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 ADAD2Q8NCV1 583 aaKnown RBP3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 OR7G3Q8NG95 312 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 OR4D10Q8NGI6 311 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 CKAP2Q8WWK9 683 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 TMEM190Q8WZ59 177 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 PIK3R3Q92569 461 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 GDAP1L1Q96MZ0 367 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 TSSK2Q96PF2 358 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 PARK7Q99497 189 aaKnown RBP3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 CLEC7AQ9BXN2 247 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 DGCR6LQ9BY27 220 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 TRIM7Q9C029 511 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 C10orf88Q9H8K7 445 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 TBC1D13Q9NVG8 400 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 ATAD3AQ9NVI7 634 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 AGTPBP1Q9UPW5 1226 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 GAB2Q9UQC2 676 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 MRPS28Q9Y2Q9 187 aaKnown RBP3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 KCNK7Q9Y2U2 307 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 NPHP3Q7Z494 1330 aa3.32□□□□□ -1.88
HMGB1P36-201ENST00000487709 RNF123Q5XPI4 1314 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 A0A0U1RQK1 487 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 C13orf42A0A1B0GVH6 325 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 ILVBLA1L0T0 632 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 ZNF320A2RRD8 509 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 SDR42E2A6NKP2 422 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 GRAP2O75791 330 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 SEC24AO95486 1093 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 VTNP04004 478 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 CEBPBP17676 345 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 ELAVL4P26378 380 aaKnown RBP3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 CCND3P30281 292 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 HLA-FP30511 346 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 ATP12AP54707 1039 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 GCNT1Q02742 428 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 EFTUD2Q15029 972 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 ZFP69Q49AA0 526 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 PWWP2BQ6NUJ5 590 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 GLRX5Q86SX6 157 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 PRUNE1Q86TP1 453 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 ANKRD46Q86W74 232 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 MEX3DQ86XN8 651 aaKnown RBP3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 ZNF444Q8N0Y2 327 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 GPC2Q8N158 579 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 NUP93Q8N1F7 819 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 C10orf53Q8N6V4 93 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 CCDC185Q8N715 623 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 OR1L3Q8NH93 324 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 USP28Q96RU2 1077 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 SYT15Q9BQS2 421 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 ATG101Q9BSB4 218 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 TDRD1Q9BXT4 1180 aaKnown RBP3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 GFRA4Q9GZZ7 299 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 UBQLN3Q9H347 655 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 FGF22Q9HCT0 170 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 ZNF71Q9NQZ8 489 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 SLCO1C1Q9NYB5 712 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 PRDM4Q9UKN5 801 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 PPP1R3CQ9UQK1 317 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 WDR81Q562E7 1941 aa3.31□□□□□ -1.88
HMGB1P36-201ENST00000487709 A0A087WUV0 522 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 TRBV5-5A0A0J9YX44 114 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 FAM149AA5PLN7 773 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 A8MVM7 634 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 TCP10L2B9ZVM9 353 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 E5RGE8 158 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 SCO2O43819 266 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 MAGEC1O60732 1142 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 PRAF2O60831 178 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 DDHD2O94830 711 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 TGDSO95455 350 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 AMBPP02760 352 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 CD48P09326 243 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms