RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 SIRT5Q9NXA8 310 aa6.78□□□□□ -1.32
SF3A3-206ENST00000487062 OR6C2Q9NZP2 312 aa6.78□□□□□ -1.32
SF3A3-206ENST00000487062 ICKQ9UPZ9 632 aa6.78□□□□□ -1.32
SF3A3-206ENST00000487062 SH2B3Q9UQQ2 575 aa6.78□□□□□ -1.32
SF3A3-206ENST00000487062 POMPQ9Y244 141 aa6.78□□□□□ -1.32
SF3A3-206ENST00000487062 DLGAP4Q9Y2H0 992 aa6.78□□□□□ -1.32
SF3A3-206ENST00000487062 L3MBTL1Q9Y468 752 aa6.78□□□□□ -1.32
SF3A3-206ENST00000487062 PCDHGA7Q9Y5G6 932 aa6.78□□□□□ -1.32
SF3A3-206ENST00000487062 EML5Q05BV3 1969 aa6.78□□□□□ -1.32
SF3A3-206ENST00000487062 TP53BP1Q12888 1972 aaPredicted RBP6.78□□□□□ -1.32
SF3A3-206ENST00000487062 GNG14A0A1W2PPG7 69 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 A0A1W2PPV9 198 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 TRBC2A0A5B9 178 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 A6NCN8 305 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 ISM1B1AKI9 464 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 C9JVG2 144 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 ENTPD5O75356 428 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 SEMA3DO95025 777 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 KCNH1O95259 989 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 PSMG1O95456 288 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 VIPP01282 170 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 ANXA4P09525 319 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 SDC1P18827 310 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 XRCC1P18887 633 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 TIA1P31483 386 aaKnown RBP eCLIP6.77□□□□□ -1.333e-7■□□□□ 8.3
SF3A3-206ENST00000487062 RPL3P39023 403 aaKnown RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 SLC19A1P41440 591 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 ZFP36L2P47974 494 aaKnown RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 PXNP49023 591 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 SLC7A2P52569 658 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 AP2B1P63010 937 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 MEF2AQ02078 507 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 SRSF11Q05519 484 aaKnown RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 TRAP1Q12931 704 aaKnown RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 MTAPQ13126 283 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 EIF2B5Q13144 721 aaKnown RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 PWP1Q13610 501 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 CEACAM7Q14002 265 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 FLOT2Q14254 428 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 FZD2Q14332 565 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 PTGR1Q14914 329 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 KIR2DS3Q14952 304 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 PLCL1Q15111 1095 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 ELOCQ15369 112 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 TLR1Q15399 786 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 SF1Q15637 639 aaKnown RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 ZNF423Q2M1K9 1284 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 FAM174BQ3ZCQ3 159 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 C8orf82Q6P1X6 216 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 AAGABQ6PD74 315 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 IYDQ6PHW0 289 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 PAGE2Q7Z2X7 111 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 ADCK2Q7Z695 626 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 DHDDSQ86SQ9 333 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 GPR180Q86V85 440 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 AMIGO1Q86WK6 493 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 NRROSQ86YC3 692 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 HPS6Q86YV9 775 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 RBM12BQ8IXT5 1001 aaKnown RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 SLC22A18ASQ8N1D0 253 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 RNF175Q8N4F7 328 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 C1orf52Q8N6N3 182 aaKnown RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 FRMD1Q8N878 549 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 LINC01555Q8NAE3 123 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 OR4K1Q8NGD4 311 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 OR2A1Q8NGT9 310 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 CCL4L1Q8NHW4 92 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 CHTF18Q8WVB6 975 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 WDR60Q8WVS4 1066 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 SLC13A3Q8WWT9 602 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 VPS33AQ96AX1 596 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 TESCQ96BS2 214 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 CCDC124Q96CT7 223 aaKnown RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 SLC6A18Q96N87 628 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 QRFPRQ96P65 431 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 TSSK3Q96PN8 268 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 OR52E6Q96RD3 313 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 PRPF18Q99633 342 aaKnown RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 SH3GL1Q99961 368 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 RHBGQ9H310 441 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 SRMSQ9H3Y6 488 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 ACTL8Q9H568 366 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 XKR8Q9H6D3 395 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 RNPEPL1Q9HAU8 725 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 IL1RL2Q9HB29 575 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 POT1Q9NUX5 634 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 CUEDC1Q9NWM3 386 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 SCHIP1Q9P0W5 487 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 TAAR2Q9P1P5 351 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 TMEM181Q9P2C4 612 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 ZNF624Q9P2J8 865 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 SUCOQ9UBS9 1254 aaKnown RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 APOBEC3BQ9UH17 382 aaKnown RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 ANGPTL2Q9UKU9 493 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 SNX7Q9UNH6 387 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 AP3M1Q9Y2T2 418 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 PCDHGA2Q9Y5H1 932 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 TDRD6O60522 2096 aaKnown RBP6.77□□□□□ -1.33
SF3A3-206ENST00000487062 HEATR5BQ9P2D3 2071 aa6.77□□□□□ -1.33
SF3A3-206ENST00000487062 TRBV23OR9-2A0A075B6M9 112 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms