RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 BRICD5Q6PL45 260 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 MBOAT1Q6ZNC8 495 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 PLD3Q8IV08 490 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 GPATCH11Q8N954 259 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 ABHD11Q8NFV4 315 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 OR56A3Q8NH54 315 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 PPP4R1Q8TF05 950 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 ATL1Q8WXF7 558 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 ANKRD7Q92527 254 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 TM4SF19Q96DZ7 209 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 MMABQ96EY8 250 aaPredicted RBP13.68□□□□□ -0.22
CLDN11-207ENST00000486975 AGAP4Q96P64 663 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 KRT12Q99456 494 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 OLFM1Q99784 485 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 HAUS8Q9BT25 410 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 SARGQ9BW04 601 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 TRIM54Q9BYV2 358 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 PRDM9Q9NQV7 894 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 ABCF3Q9NUQ8 709 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 NSMCE4AQ9NXX6 385 aa13.68□□□□□ -0.22
CLDN11-207ENST00000486975 NOVA2Q9UNW9 492 aaKnown RBP13.68□□□□□ -0.22
CLDN11-207ENST00000486975 SPENQ96T58 3664 aaKnown RBP13.67□□□□□ -0.22
CLDN11-207ENST00000486975 SHANK1Q9Y566 2161 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 LOC102723996A0A087X1L8 192 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 A0A0A6YYC8 382 aaPredicted RBP13.67□□□□□ -0.22
CLDN11-207ENST00000486975 PABPN1LA6NDY0 278 aaKnown RBP13.67□□□□□ -0.22
CLDN11-207ENST00000486975 FAM187AA6NFU0 413 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 I3L1I5 382 aaPredicted RBP13.67□□□□□ -0.22
CLDN11-207ENST00000486975 NPPBP16860 134 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 ZNF37AP17032 561 aaPredicted RBP13.67□□□□□ -0.22
CLDN11-207ENST00000486975 RPL21P46778 160 aaKnown RBP13.67□□□□□ -0.22
CLDN11-207ENST00000486975 AVPR1BP47901 424 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 EMP2P54851 167 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 Q0VFX4 171 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 ZXDCQ2QGD7 858 aaPredicted RBP13.67□□□□□ -0.22
CLDN11-207ENST00000486975 PRR30Q53SZ7 412 aaPredicted RBP13.67□□□□□ -0.22
CLDN11-207ENST00000486975 CRB2Q5IJ48 1285 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 TMEM214Q6NUQ4 689 aaKnown RBP13.67□□□□□ -0.22
CLDN11-207ENST00000486975 ZC3HC1Q86WB0 502 aaKnown RBP13.67□□□□□ -0.22
CLDN11-207ENST00000486975 ANKMY2Q8IV38 441 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 ZC3H7AQ8IWR0 971 aaKnown RBP13.67□□□□□ -0.22
CLDN11-207ENST00000486975 CAMKVQ8NCB2 501 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 FBXO36Q8NEA4 188 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 FBXL8Q96CD0 374 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 WDR77Q9BQA1 342 aaPredicted RBP13.67□□□□□ -0.22
CLDN11-207ENST00000486975 MCMBPQ9BTE3 642 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 SLC29A3Q9BZD2 475 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 TRIM31Q9BZY9 425 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 ATG10Q9H0Y0 220 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 ZBTB20Q9HC78 741 aaPredicted RBP13.67□□□□□ -0.22
CLDN11-207ENST00000486975 ARL15Q9NXU5 204 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 LUZP4Q9P127 313 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 SH2B3Q9UQQ2 575 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 PSAT1Q9Y617 370 aa13.67□□□□□ -0.22
CLDN11-207ENST00000486975 MDC1Q14676 2089 aaKnown RBP13.67□□□□□ -0.22
CLDN11-207ENST00000486975 RELNP78509 3460 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 DOPEY2Q9Y3R5 2298 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 ALOX12BO75342 701 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 COX6A1P12074 109 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 CDH1P12830 882 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 CXCR2P25025 360 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 GRK3P35626 688 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 FASTKD3Q14CZ7 662 aaKnown RBP13.66□□□□□ -0.22
CLDN11-207ENST00000486975 PPP1R3AQ16821 1122 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 TMEM205Q6UW68 189 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 SBSNQ6UWP8 590 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 NDUFAF7Q7L592 441 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 MAATS1Q7Z4T9 603 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 PARP9Q8IXQ6 854 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 PRSS58Q8IYP2 241 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 NKAPQ8N5F7 415 aaKnown RBP13.66□□□□□ -0.22
CLDN11-207ENST00000486975 SPATA4Q8NEY3 305 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 OR4K1Q8NGD4 311 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 BARD1Q99728 777 aaKnown RBP13.66□□□□□ -0.22
CLDN11-207ENST00000486975 MESP1Q9BRJ9 268 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 ERP44Q9BS26 406 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 ILKAPQ9H0C8 392 aaPredicted RBP13.66□□□□□ -0.22
CLDN11-207ENST00000486975 RHOJQ9H4E5 214 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 ZNF160Q9HCG1 818 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 RIC8BQ9NVN3 520 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 WHRNQ9P202 907 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 SNX24Q9Y343 169 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 MRPS2Q9Y399 296 aaKnown RBP13.66□□□□□ -0.22
CLDN11-207ENST00000486975 SLC22A7Q9Y694 548 aa13.66□□□□□ -0.22
CLDN11-207ENST00000486975 USP9YO00507 2555 aaPredicted RBP13.65□□□□□ -0.22
CLDN11-207ENST00000486975 IGHV1-45A0A0A0MS14 117 aa13.65□□□□□ -0.22
CLDN11-207ENST00000486975 NSG1A0A0A6YYJ2 146 aa13.65□□□□□ -0.22
CLDN11-207ENST00000486975 FAM95CA0A1B0GW59 222 aa13.65□□□□□ -0.22
CLDN11-207ENST00000486975 EIF3HO15372 352 aaKnown RBP eCLIP13.65□□□□□ -0.22
CLDN11-207ENST00000486975 BMP10O95393 424 aa13.65□□□□□ -0.22
CLDN11-207ENST00000486975 SERPINA7P05543 415 aa13.65□□□□□ -0.22
CLDN11-207ENST00000486975 SLC35G6P0C7Q6 338 aa13.65□□□□□ -0.22
CLDN11-207ENST00000486975 CD46P15529 392 aa13.65□□□□□ -0.22
CLDN11-207ENST00000486975 GNLYP22749 145 aa13.65□□□□□ -0.22
CLDN11-207ENST00000486975 BCL6P41182 706 aa13.65□□□□□ -0.22
CLDN11-207ENST00000486975 UQCRFS1P47985 274 aa13.65□□□□□ -0.22
CLDN11-207ENST00000486975 CCR8P51685 355 aa13.65□□□□□ -0.22
CLDN11-207ENST00000486975 SNRPNP63162 240 aaKnown RBP13.65□□□□□ -0.22
CLDN11-207ENST00000486975 CDKL1Q00532 357 aa13.65□□□□□ -0.22
CLDN11-207ENST00000486975 CALCOCO2Q13137 446 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms