RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CLPBQ9H078 707 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 RBM38Q9H0Z9 239 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 MAGEH1Q9H213 219 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 PDCL3Q9H2J4 239 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 TCEAL2Q9H3H9 227 aaPredicted RBP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 ZDHHC6Q9H6R6 413 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 SIX2Q9NPC8 291 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 PLCB1Q9NQ66 1216 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 TMEM248Q9NWD8 314 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 SELENONQ9NZV5 590 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 APOBEC3BQ9UH17 382 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 IL17BQ9UHF5 180 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 RWDD2AQ9UIY3 292 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 DNAJC12Q9UKB3 198 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 HPCAL4Q9UM19 191 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 MFHAS1Q9Y4C4 1052 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 PCDHGB6Q9Y5F9 930 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 SNX10Q9Y5X0 201 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 SDK2Q58EX2 2172 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 UBR5O95071 2799 aaPredicted RBP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 SPTAN1Q13813 2472 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 A0A1W2PQM1 296 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 ANKRD62A6NC57 917 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 D6RAR5 112 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 GOLGA8SH3BPF8 625 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 CASC3O15234 703 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 GAS8-AS1O95177 125 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 IFNA2P01563 188 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 RPLP0P05388 317 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 ANXA2P07355 339 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 PLEKP08567 350 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 LIPCP11150 499 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 FGF3P11487 239 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 CTSEP14091 401 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 CYP11B1P15538 503 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 MST1P26927 711 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 PTPN9P43378 593 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 MTIF2P46199 727 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 PDLIM4P50479 330 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 YBEYP58557 167 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 CCL7P80098 99 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 ZFP36L1Q07352 338 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 ELP6Q0PNE2 266 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 DRAP1Q14919 205 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 ALG11Q2TAA5 492 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 KLHL40Q2TBA0 621 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 WSCD2Q2TBF2 565 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 CCDC14Q49A88 953 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 KLHDC7AQ5VTJ3 777 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 TRNP1Q6NT89 227 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 RWDD4Q6NW29 188 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 DARS2Q6PI48 645 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 ENPP7Q6UWV6 458 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 STRADAQ7RTN6 431 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 CUZD1Q86UP6 607 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 VPS36Q86VN1 386 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 FAM131BQ86XD5 332 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 ZNF677Q86XU0 584 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 FAM114A1Q8IWE2 563 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 DDIASQ8IXT1 998 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 OR52L2PQ8NGH6 319 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 OR6K2Q8NGY2 324 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 CXorf40AQ8TE69 158 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 CENPIQ92674 756 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 MED30Q96HR3 178 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 CFAP57Q96MR6 1250 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 GDAP1L1Q96MZ0 367 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 APOOQ9BUR5 198 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 NAA15Q9BXJ9 866 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 NDST4Q9H3R1 872 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 LRRN3Q9H3W5 708 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 EPB41L5Q9HCM4 733 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 MBNL1Q9NR56 388 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 STARD5Q9NSY2 213 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 SIRT3Q9NTG7 399 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 SEPT10Q9P0V9 454 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 APPL1Q9UKG1 709 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 GPR34Q9UPC5 381 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 LAMP3Q9UQV4 416 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 ITM2BQ9Y287 266 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 DGKBQ9Y6T7 804 aa3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 USP9YO00507 2555 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-205ENST00000486941 hCG_2014768A0A024R1R8 64 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 TSPAN11A1L157 253 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 FAM72CH0Y354 149 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 BUB1O43683 1085 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 NUDT21O43809 227 aaKnown RBP3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 TMCC1O94876 653 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 IGSF6O95976 241 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 TNFP01375 233 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 HOXC4P09017 264 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 PNMA6AP0CW24 399 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 UCHL3P15374 230 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 MMP8P22894 467 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 CD82P27701 267 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 SDC4P31431 198 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 TRIM23P36406 574 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 RFX2P48378 723 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 CSNK1DP48730 415 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms