RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ZNF517Q6ZMY9 492 aaPredicted RBP12.3□□□□□ -0.44
VPS52-218ENST00000482399 DEF8Q6ZN54 512 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 SNX20Q7Z614 316 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 RAB43Q86YS6 212 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 NAGSQ8N159 534 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 CYP4Z2PQ8N1L4 340 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 ST13P5Q8NFI4 369 aaPredicted RBP12.3□□□□□ -0.44
VPS52-218ENST00000482399 ENKURQ8TC29 256 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 VMP1Q96GC9 406 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 DIRAS2Q96HU8 199 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 MGLLQ99685 303 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 CCM2Q9BSQ5 444 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 DUSP21Q9H596 190 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 PEX16Q9Y5Y5 336 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 TMEM88BA6NKF7 163 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 SLC38A8A6NNN8 435 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 WNT9AO14904 365 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 TSPAN19P0C672 248 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 PRPS2P11908 318 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 KRR1Q13601 381 aaKnown RBP12.29□□□□□ -0.44
VPS52-218ENST00000482399 EXOC3L2Q2M3D2 409 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 PROX2Q3B8N5 592 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 SERPINA13PQ6UXR4 307 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 TMPRSS11BQ86T26 416 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 C11orf65Q8NCR3 313 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 PJA1Q8NG27 643 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 C17orf50Q8WW18 174 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 IPCEF1Q8WWN9 437 aaPredicted RBP12.29□□□□□ -0.44
VPS52-218ENST00000482399 PEX13Q92968 403 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 PHOX2BQ99453 314 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 CPNE5Q9HCH3 593 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 MIA3Q5JRA6 1907 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 ZNF197O14709 1029 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 AREL1O15033 823 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 PCDH7O60245 1069 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 KLKB1P03952 638 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 OR56A5P0C7T3 313 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 SLC19A1P41440 591 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 MEF2AQ02078 507 aaPredicted RBP12.29□□□□□ -0.44
VPS52-218ENST00000482399 GBX1Q14549 363 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 ADNP2Q6IQ32 1131 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 RETSATQ6NUM9 610 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 GDPD3Q7L5L3 318 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 ZZZ3Q8IYH5 903 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 NFKBIDQ8NI38 313 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 C1GALT1C1Q96EU7 318 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 C8orf48Q96LL4 319 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 TRIB3Q96RU7 358 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 SLC30A2Q9BRI3 323 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 DNAJC11Q9NVH1 559 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 TAS2R9Q9NYW1 312 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 TMCC3Q9ULS5 477 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 ARID1BQ8NFD5 2236 aaPredicted RBP12.29□□□□□ -0.44
VPS52-218ENST00000482399 LCTP09848 1927 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 C2orf78A6NCI8 922 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 TBKBP1A7MCY6 615 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 COCHO43405 550 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 CYP2A7P20853 494 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 PTNP21246 168 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 HNF1BP35680 557 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 SNRPD2P62316 118 aaKnown RBP12.29□□□□□ -0.44
VPS52-218ENST00000482399 RPS26P62854 115 aaKnown RBP12.29□□□□□ -0.44
VPS52-218ENST00000482399 PPIGQ13427 754 aaKnown RBP eCLIP12.29□□□□□ -0.443e-7■■■■□ 19.8
VPS52-218ENST00000482399 LEXMQ3ZCV2 418 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 TNFAIP8L2Q6P589 184 aaPredicted RBP12.29□□□□□ -0.44
VPS52-218ENST00000482399 DEPDC4Q8N2C3 294 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 AQP11Q8NBQ7 271 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 MYLIPQ8WY64 445 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 GGHQ92820 318 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 SCAMP4Q969E2 229 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 OTUB1Q96FW1 271 aaPredicted RBP12.29□□□□□ -0.44
VPS52-218ENST00000482399 FUBP3Q96I24 572 aaKnown RBP eCLIP12.29□□□□□ -0.44
VPS52-218ENST00000482399 CCDC115Q96NT0 180 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 ASPNQ9BXN1 380 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 BRD9Q9H8M2 597 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 FNIP2Q9P278 1114 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 OARD1Q9Y530 152 aa12.29□□□□□ -0.44
VPS52-218ENST00000482399 BRWD3Q6RI45 1802 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 CCDC182A6NF36 153 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 ANKDD1BA6NHY2 528 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 TGFB1P01137 390 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 BPIP17213 487 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 CD6P30203 668 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 GRK5P34947 590 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 PTPN5P54829 565 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.28□□□□□ -0.44
VPS52-218ENST00000482399 RTP2Q5QGT7 225 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 BCDIN3DQ7Z5W3 292 aaKnown RBP12.28□□□□□ -0.44
VPS52-218ENST00000482399 YIPF6Q96EC8 236 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 MS4A4AQ96JQ5 239 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 NIPSNAP1Q9BPW8 284 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 POLR2J2Q9GZM3 115 aaKnown RBP12.28□□□□□ -0.44
VPS52-218ENST00000482399 PLSCR3Q9NRY6 295 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 CLN6Q9NWW5 311 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 KCTD5Q9NXV2 234 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 KIAA1522Q9P206 1035 aaPredicted RBP12.28□□□□□ -0.44
VPS52-218ENST00000482399 VPS29Q9UBQ0 182 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 NUFIP1Q9UHK0 495 aaKnown RBP12.28□□□□□ -0.44
VPS52-218ENST00000482399 AP3M1Q9Y2T2 418 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 PCDHB7Q9Y5E2 793 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms