RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 PLCD4Q9BRC7 762 aa8.92□□□□□ -0.98
SMARCE1-210ENST00000481231 DESI2Q9BSY9 194 aa8.92□□□□□ -0.98
SMARCE1-210ENST00000481231 YIPF2Q9BWQ6 316 aa8.92□□□□□ -0.98
SMARCE1-210ENST00000481231 UCK2Q9BZX2 261 aa8.92□□□□□ -0.98
SMARCE1-210ENST00000481231 TGIF2Q9GZN2 237 aa8.92□□□□□ -0.98
SMARCE1-210ENST00000481231 RNF32Q9H0A6 362 aa8.92□□□□□ -0.98
SMARCE1-210ENST00000481231 ZNF700Q9H0M5 742 aa8.92□□□□□ -0.98
SMARCE1-210ENST00000481231 C14orf105Q9NVL8 296 aa8.92□□□□□ -0.98
SMARCE1-210ENST00000481231 ZNF358Q9NW07 568 aa8.92□□□□□ -0.98
SMARCE1-210ENST00000481231 PAK5Q9P286 719 aa8.92□□□□□ -0.98
SMARCE1-210ENST00000481231 CAPN6Q9Y6Q1 641 aa8.92□□□□□ -0.98
SMARCE1-210ENST00000481231 A0A0A6YYC8 382 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 GOLGA8KD6RF30 607 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 GOLGA8TH3BQL2 631 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 I3L1I5 382 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 MYO1CO00159 1063 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 P2RX6O15547 441 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 PRPF4O43172 522 aaKnown RBP eCLIP8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 FOXS1O43638 330 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 ANXA5P08758 320 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 ABOP16442 354 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 MSX1P28360 303 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 FMO4P31512 558 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 RPA3P35244 121 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 RPL22P35268 128 aaKnown RBP8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 SNRPNP63162 240 aaKnown RBP8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 KIF5AQ12840 1032 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 TSTA3Q13630 321 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 SYT16Q17RD7 645 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 ACSBG2Q5FVE4 666 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 GARNL3Q5VVW2 1013 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 CES4AQ5XG92 561 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 ZNF425Q6IV72 752 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 LRRC8BQ6P9F7 803 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 TMEM205Q6UW68 189 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 CES3Q6UWW8 571 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 NEK10Q6ZWH5 1172 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 DOLPP1Q86YN1 238 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 SLC13A5Q86YT5 568 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 PHF10Q8WUB8 498 aaKnown RBP8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 IMMP1LQ96LU5 166 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 OR2A5Q96R48 311 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 POLDIP3Q9BY77 421 aaKnown RBP8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 IL22Q9GZX6 179 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 DRC3Q9H069 523 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 MRPS30Q9NP92 439 aaKnown RBP8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 MKKSQ9NPJ1 570 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 EIF2B3Q9NR50 452 aaKnown RBP8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 COQ3Q9NZJ6 369 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 LRFN1Q9P244 771 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 GALPQ9UBC7 116 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 KCNN3Q9UGI6 736 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 ADAM21Q9UKJ8 722 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 MKL2Q9ULH7 1088 aa8.91□□□□□ -0.98
SMARCE1-210ENST00000481231 OR5H15A6NDH6 313 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 NPIPA5E9PKD4 350 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 E9PLN8 166 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 H3BMM5 538 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 PSIP1O75475 530 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 VAPBO95292 243 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 LY6G6DO95868 133 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 ESR1P03372 595 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 EZRP15311 586 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 DNASE1P24855 282 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 MGAT1P26572 445 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 DGKQP52824 942 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 PNLIPRP1P54315 467 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 MAT1AQ00266 395 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 ZNF33BQ06732 778 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 PRDX1Q06830 199 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 ARHGAP19Q14CB8 494 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 TYSND1Q2T9J0 566 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 KLHL38Q2WGJ6 581 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 ANKRD20A4Q4UJ75 823 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 RNF187Q5TA31 235 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 SEL1L2Q5TEA6 688 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 ABHD17BQ5VST6 288 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 ICE2Q659A1 982 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 MRNIPQ6NTE8 343 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 CEP128Q6ZU80 1094 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 SDCCAG8Q86SQ7 713 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 PLD3Q8IV08 490 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 TMEM139Q8IV31 216 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 SPNS2Q8IVW8 549 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 MARVELD2Q8N4S9 558 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 SUN3Q8TAQ9 357 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 THAP3Q8WTV1 239 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 RERGQ96A58 199 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 MFSD3Q96ES6 412 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 RMND5BQ96G75 393 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 PWWP2AQ96N64 755 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 PKP4Q99569 1192 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 BAG1Q99933 345 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 VKORC1Q9BQB6 163 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 GPATCH1Q9BRR8 931 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 KIFC1Q9BW19 673 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 VN1R1Q9GZP7 353 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 FAM114A2Q9NRY5 505 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 SYBUQ9NX95 663 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 BFARQ9NZS9 450 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms