RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ABCF3Q9NUQ8 709 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 WHRNQ9P202 907 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 CHMP2BQ9UQN3 213 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 UTP11Q9Y3A2 253 aaKnown RBP10.87□□□□□ -0.67
CCM2-213ENST00000480658 DYRK1BQ9Y463 629 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 PCDHGA10Q9Y5H3 936 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 COPG1Q9Y678 874 aaKnown RBP10.87□□□□□ -0.67
CCM2-213ENST00000480658 KCNE2Q9Y6J6 123 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 FLNBO75369 2602 aaKnown RBP10.86□□□□□ -0.67
CCM2-213ENST00000480658 A0A088AWK7 358 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 IGHV1-45A0A0A0MS14 117 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 TRAV17A0A0B4J275 112 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 TRBC2A0A5B9 178 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 KRT87PA6NCN2 255 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 TTI1O43156 1089 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 ALOX12BO75342 701 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 WFS1O76024 890 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 COX6A1P12074 109 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 ZNF10P21506 573 aaPredicted RBP10.86□□□□□ -0.67
CCM2-213ENST00000480658 CDKN2DP55273 166 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 PER3P56645 1201 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 CSNK1G2P78368 415 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 ARG2P78540 354 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 POU4F1Q01851 419 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 PDIA2Q13087 525 aaKnown RBP10.86□□□□□ -0.67
CCM2-213ENST00000480658 NAE1Q13564 534 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 CSHL1Q14406 222 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 EXT1Q16394 746 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 CDKL4Q5MAI5 379 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 TMEM205Q6UW68 189 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 FAM180AQ6UWF9 173 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 CEP128Q6ZU80 1094 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 CYS1Q717R9 158 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 CCDC91Q7Z6B0 441 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 ZBED8Q8IZ13 594 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 ARHGEF39Q8N4T4 335 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 AMER3Q8N944 861 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 MFSD9Q8NBP5 474 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 FBXO36Q8NEA4 188 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 TRPV3Q8NET8 790 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 SSC4DQ8WTU2 575 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 PYROXD1Q8WU10 500 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.86□□□□□ -0.67
CCM2-213ENST00000480658 SLC13A3Q8WWT9 602 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 AIF1LQ9BQI0 150 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 MFRPQ9BY79 579 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 ZNF700Q9H0M5 742 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 RHOJQ9H4E5 214 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 ZNF160Q9HCG1 818 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 MKL2Q9ULH7 1088 aa10.86□□□□□ -0.67
CCM2-213ENST00000480658 SETXQ7Z333 2677 aaKnown RBP10.85□□□□□ -0.67
CCM2-213ENST00000480658 SPENQ96T58 3664 aaKnown RBP10.85□□□□□ -0.67
CCM2-213ENST00000480658 A0A0A6YYC8 382 aaPredicted RBP10.85□□□□□ -0.67
CCM2-213ENST00000480658 I3L1I5 382 aaPredicted RBP10.85□□□□□ -0.67
CCM2-213ENST00000480658 NDUFS4O43181 175 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 MLYCDO95822 493 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 TSPAN12O95859 305 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 PRR35P0CG20 571 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 EDN3P14138 238 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 GNAZP19086 355 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 GNLYP22749 145 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 GABRB3P28472 473 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 GLRBP48167 497 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 CDC16Q13042 620 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 MINDY4Q4G0A6 757 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 MSS51Q4VC12 460 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 VWA2Q5GFL6 755 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 RBM20Q5T481 1227 aaKnown RBP10.85□□□□□ -0.67
CCM2-213ENST00000480658 MFSD4BQ5TF39 518 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 ABHD17BQ5VST6 288 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 SHISA6Q6ZSJ9 500 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 ZC3HC1Q86WB0 502 aaKnown RBP10.85□□□□□ -0.67
CCM2-213ENST00000480658 BCORP1Q8N888 145 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 ST6GALNAC3Q8NDV1 305 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 OR4K1Q8NGD4 311 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 ADAMTS18Q8TE60 1221 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 SLC5A11Q8WWX8 675 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 SNRNP40Q96DI7 357 aaKnown RBP10.85□□□□□ -0.67
CCM2-213ENST00000480658 TM4SF19Q96DZ7 209 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 BARD1Q99728 777 aaKnown RBP10.85□□□□□ -0.67
CCM2-213ENST00000480658 ERP44Q9BS26 406 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 ATG10Q9H0Y0 220 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 PELI2Q9HAT8 420 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 MOCS1Q9NZB8 636 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 ZFP69BQ9UJL9 534 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 ADAMTS6Q9UKP5 1117 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 OARD1Q9Y530 152 aa10.85□□□□□ -0.67
CCM2-213ENST00000480658 FAM95CA0A1B0GW59 222 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 CCDC189A1A4V9 331 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 ANKUB1A6NFN9 424 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 TCP11X1B4DZS4 312 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 FOXS1O43638 330 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 NRP2O60462 931 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 CDH1P12830 882 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 NPPBP16860 134 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 BCL6P41182 706 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 XCR1P46094 333 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 TAS2R50P59544 299 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 ATP6V0D1P61421 351 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 STXBP1P61764 594 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms