RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 RNF44Q7L0R7 432 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 TRPM8Q7Z2W7 1104 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 SPATA19Q7Z5L4 167 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 SPRED1Q7Z699 444 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 ZFAND4Q86XD8 727 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 PLXDC1Q8IUK5 500 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 EID2Q8N6I1 236 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 BAHD1Q8TBE0 780 aaPredicted RBP12.07□□□□□ -0.48
SIK3-209ENST00000480222 CCDC74AQ96AQ1 378 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 HBEGFQ99075 208 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 MTERF1Q99551 399 aaKnown RBP12.07□□□□□ -0.48
SIK3-209ENST00000480222 SERPINI1Q99574 410 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 DPYSL5Q9BPU6 564 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 NMUR2Q9GZQ4 415 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 CHRNA10Q9GZZ6 450 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 ZMYND15Q9H091 742 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 ABCG4Q9H172 646 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 MYLK2Q9H1R3 596 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 LRTM1Q9HBL6 345 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 C1GALT1Q9NS00 363 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 FARSBQ9NSD9 589 aaKnown RBP12.07□□□□□ -0.48
SIK3-209ENST00000480222 C1orf109Q9NX04 203 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 ASIC5Q9NY37 505 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 ZFP69BQ9UJL9 534 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 U3KQA8 63 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 HEATR5BQ9P2D3 2071 aa12.07□□□□□ -0.48
SIK3-209ENST00000480222 SNRNP200O75643 2136 aaKnown RBP12.07□□□□□ -0.48
SIK3-209ENST00000480222 RIF1Q5UIP0 2472 aaKnown RBP12.06□□□□□ -0.48
SIK3-209ENST00000480222 GVINP1Q7Z2Y8 2422 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 ANKDD1BA6NHY2 528 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 MAGEB17A8MXT2 336 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 PROB1E7EW31 1015 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 HAT1O14929 419 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 OR1F1O43749 312 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 CDH3P22223 829 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 MAPK1P28482 360 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 ALDH4A1P30038 563 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 MRPL19P49406 292 aaKnown RBP12.06□□□□□ -0.48
SIK3-209ENST00000480222 NEK2P51955 445 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 STX1BP61266 288 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 DAB2P98082 770 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 EMX2Q04743 252 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 SQSTM1Q13501 440 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 CUL3Q13618 768 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 SQLEQ14534 574 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 RBBP5Q15291 538 aaKnown RBP12.06□□□□□ -0.48
SIK3-209ENST00000480222 CSRP2Q16527 193 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 GSTA3Q16772 222 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 AP5B1Q2VPB7 878 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 SPIN4Q56A73 249 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 C6orf136Q5SQH8 315 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 FAM219BQ5XKK7 198 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 IRGCQ6NXR0 463 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 WDR74Q6RFH5 385 aaPredicted RBP12.06□□□□□ -0.48
SIK3-209ENST00000480222 SCIMPQ6UWF3 145 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 DBX2Q6ZNG2 339 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 CLNKQ7Z7G1 428 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 MTDHQ86UE4 582 aaKnown RBP12.06□□□□□ -0.48
SIK3-209ENST00000480222 TRIM73Q86UV7 250 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 FAM9CQ8IZT9 166 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 CPSF7Q8N684 471 aaKnown RBP12.06□□□□□ -0.48
SIK3-209ENST00000480222 C19orf47Q8N9M1 422 aaKnown RBP12.06□□□□□ -0.48
SIK3-209ENST00000480222 FNDC5Q8NAU1 212 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 MFSD9Q8NBP5 474 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 ZNF740Q8NDX6 193 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 TRPV3Q8NET8 790 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 ERP27Q96DN0 273 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 CMTM7Q96FZ5 175 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 CENPKQ9BS16 269 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 EDEM2Q9BV94 578 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 MS4A8Q9BY19 250 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 ZNF385DQ9H6B1 395 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 PRM3Q9NNZ6 103 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 SAR1AQ9NR31 198 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 NOP53Q9NZM5 478 aaKnown RBP12.06□□□□□ -0.48
SIK3-209ENST00000480222 NCDNQ9UBB6 729 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 VPS29Q9UBQ0 182 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 SLC12A4Q9UP95 1085 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 PCDHGA4Q9Y5G9 962 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 AP1M2Q9Y6Q5 423 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 RALGAPA1Q6GYQ0 2036 aa12.06□□□□□ -0.48
SIK3-209ENST00000480222 ARID1BQ8NFD5 2236 aaPredicted RBP12.05□□□□□ -0.48
SIK3-209ENST00000480222 CABIN1Q9Y6J0 2220 aa12.05□□□□□ -0.48
SIK3-209ENST00000480222 CCT8L1PA6NM43 557 aa12.05□□□□□ -0.48
SIK3-209ENST00000480222 CAPN5O15484 640 aaPredicted RBP12.05□□□□□ -0.48
SIK3-209ENST00000480222 PEX11AO75192 247 aa12.05□□□□□ -0.48
SIK3-209ENST00000480222 LMNAP02545 664 aaKnown RBP12.05□□□□□ -0.48
SIK3-209ENST00000480222 C9P02748 559 aa12.05□□□□□ -0.48
SIK3-209ENST00000480222 NCF2P19878 526 aaPredicted RBP12.05□□□□□ -0.48
SIK3-209ENST00000480222 PTX3P26022 381 aaPredicted RBP12.05□□□□□ -0.48
SIK3-209ENST00000480222 BCL6P41182 706 aa12.05□□□□□ -0.48
SIK3-209ENST00000480222 PPM1FP49593 454 aaPredicted RBP12.05□□□□□ -0.48
SIK3-209ENST00000480222 ARFIP1P53367 373 aa12.05□□□□□ -0.48
SIK3-209ENST00000480222 OR1D5P58170 312 aa12.05□□□□□ -0.48
SIK3-209ENST00000480222 PPP1CAP62136 330 aa12.05□□□□□ -0.48
SIK3-209ENST00000480222 RPS13P62277 151 aaKnown RBP12.05□□□□□ -0.48
SIK3-209ENST00000480222 RPL38P63173 70 aaKnown RBP12.05□□□□□ -0.48
SIK3-209ENST00000480222 HMGCS1Q01581 520 aa12.05□□□□□ -0.48
SIK3-209ENST00000480222 GALNTL6Q49A17 601 aa12.05□□□□□ -0.48
SIK3-209ENST00000480222 ADNP2Q6IQ32 1131 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms