RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 FEZF1A0PJY2 475 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 KLF11O14901 512 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 HAT1O14929 419 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 SEC16AO15027 2179 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 ITM2AO43736 263 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 NRP2O60462 931 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 SRPX2O60687 465 aaPredicted RBP9.18□□□□□ -0.94
CD46-214ENST00000480003 RASSF9O75901 435 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 CLDN9O95484 217 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 ESRRBO95718 433 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 OTCP00480 354 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 SERPINE1P05121 402 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 BMP2P12643 396 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 JUPP14923 745 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 FOLR1P15328 257 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 TSPAN8P19075 237 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 CXCR2P25025 360 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 SERPINB5P36952 375 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 HNF4AP41235 474 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 SCTRP47872 440 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 PPM1FP49593 454 aaPredicted RBP9.18□□□□□ -0.94
CD46-214ENST00000480003 SEPHS1P49903 392 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 CCNG1P51959 295 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 PKNOX1P55347 436 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 ERVPABLB-1P60509 514 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 REEP5Q00765 189 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 MC2RQ01718 297 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 LCP2Q13094 533 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 LAPTM5Q13571 262 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 CHI3L2Q15782 390 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 GGTA1PQ4G0N0 100 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 XKR6Q5GH73 641 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 ARL13AQ5H913 290 aaPredicted RBP9.18□□□□□ -0.94
CD46-214ENST00000480003 CFAP157Q5JU67 520 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 RNF44Q7L0R7 432 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 SYVN1Q86TM6 617 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 MCATQ8IVS2 390 aaKnown RBP9.18□□□□□ -0.94
CD46-214ENST00000480003 LAS2Q8IYD9 372 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 ARFGAP2Q8N6H7 521 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 BMPERQ8N8U9 685 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 ANKRD53Q8N9V6 530 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 MFSD9Q8NBP5 474 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 RCBTB1Q8NDN9 531 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 OR4F6Q8NGB9 312 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 RAB3IL1Q8TBN0 382 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 CKAP2Q8WWK9 683 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 SREK1Q8WXA9 508 aaKnown RBP9.18□□□□□ -0.94
CD46-214ENST00000480003 ATP6V1E2Q96A05 226 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 TM4SF19Q96DZ7 209 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 PRR11Q96HE9 360 aaPredicted RBP9.18□□□□□ -0.94
CD46-214ENST00000480003 DEPDC7Q96QD5 511 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 AIF1LQ9BQI0 150 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 RHBGQ9H310 441 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 ZNF395Q9H8N7 513 aaPredicted RBP9.18□□□□□ -0.94
CD46-214ENST00000480003 PDE7BQ9NP56 450 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 TNFRSF12AQ9NP84 129 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 INTS9Q9NV88 658 aaKnown RBP9.18□□□□□ -0.94
CD46-214ENST00000480003 OCIAD1Q9NX40 245 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 SIDT1Q9NXL6 827 aaKnown RBP9.18□□□□□ -0.94
CD46-214ENST00000480003 PSD3Q9NYI0 1048 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 CLCA2Q9UQC9 943 aa9.18□□□□□ -0.94
CD46-214ENST00000480003 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.18□□□□□ -0.94
CD46-214ENST00000480003 SPTBP11277 2137 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 LOC105369274A0A096LPK9 316 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 LOC102723532A0A0G2JNH3 316 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 A0A0J9YVX5 310 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 TRBC2A0A5B9 178 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 SERTM1A2A2V5 107 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 TMEM114B3SHH9 223 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 H0YIV9 168 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 SNNO75324 88 aaPredicted RBP9.17□□□□□ -0.94
CD46-214ENST00000480003 CSO75390 466 aaKnown RBP9.17□□□□□ -0.94
CD46-214ENST00000480003 OR4F21O95013 312 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 TBX6O95947 436 aaPredicted RBP9.17□□□□□ -0.94
CD46-214ENST00000480003 CHRNGP07510 517 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 ADRB1P08588 477 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 CSTF2P33240 577 aaKnown RBP eCLIP9.17□□□□□ -0.94
CD46-214ENST00000480003 AHRP35869 848 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 BCL6P41182 706 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 SLC1A6P48664 564 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 ABCE1P61221 599 aaKnown RBP9.17□□□□□ -0.94
CD46-214ENST00000480003 RPS15AP62244 130 aaKnown RBP9.17□□□□□ -0.94
CD46-214ENST00000480003 MEF2AQ02078 507 aaPredicted RBP9.17□□□□□ -0.94
CD46-214ENST00000480003 BST1Q10588 318 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 TARDBPQ13148 414 aaKnown RBP eCLIP9.17□□□□□ -0.94
CD46-214ENST00000480003 STX3Q13277 289 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 RCN2Q14257 317 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 KCNAB1Q14722 419 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 UGT3A2Q3SY77 523 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 ZC3H12BQ5HYM0 836 aaKnown RBP9.17□□□□□ -0.94
CD46-214ENST00000480003 PHF19Q5T6S3 580 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 FRMPD2BQ6IN97 320 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 GRHL2Q6ISB3 625 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 LETMD1Q6P1Q0 360 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 RGS9BPQ6ZS82 235 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 VN1R5Q7Z5H4 357 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 VN1R4Q7Z5H5 301 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 TMPRSS11BQ86T26 416 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 PLD3Q8IV08 490 aa9.17□□□□□ -0.94
CD46-214ENST00000480003 TRIM42Q8IWZ5 723 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms