RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 KATNA1O75449 491 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 CD63P08962 238 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 SBK3P0C264 359 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 SLC35G6P0C7Q6 338 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 KRT4P19013 534 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 TCN2P20062 427 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 ALAS2P22557 587 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 VARSP26640 1264 aaKnown RBP10.33□□□□□ -0.76
ATG4B-219ENST00000479941 AHRP35869 848 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 DLSTP36957 453 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 BCL6P41182 706 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 CASP2P42575 452 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 SCTRP47872 440 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 PIK3CGP48736 1102 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 AGTR2P50052 363 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 TMPRSS3P57727 454 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 DCDP81605 110 aaKnown RBP10.33□□□□□ -0.76
ATG4B-219ENST00000479941 REEP5Q00765 189 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 SLC18A2Q05940 514 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 PCDH1Q08174 1060 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 LAPTM5Q13571 262 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 E2F2Q14209 437 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 TBCCQ15814 346 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 NDUFA9Q16795 377 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 HKDC1Q2TB90 917 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 PAGE2BQ5JRK9 111 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 ZNF385CQ66K41 422 aaPredicted RBP10.33□□□□□ -0.76
ATG4B-219ENST00000479941 FAM199XQ6PEV8 388 aaPredicted RBP10.33□□□□□ -0.76
ATG4B-219ENST00000479941 VN1R4Q7Z5H5 301 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 CROCCP2Q86T23 111 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 ASPGQ86U10 573 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 VASH2Q86V25 355 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 IQCKQ8N0W5 287 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 KRT78Q8N1N4 520 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 TEX9Q8N6V9 391 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 PTGR2Q8N8N7 351 aaPredicted RBP10.33□□□□□ -0.76
ATG4B-219ENST00000479941 ZSCAN1Q8NBB4 408 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 TTLQ8NG68 377 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 HNRNPLLQ8WVV9 542 aaKnown RBP10.33□□□□□ -0.76
ATG4B-219ENST00000479941 SLC13A3Q8WWT9 602 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 TM4SF19Q96DZ7 209 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 PHF21BQ96EK2 531 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 WDR34Q96EX3 536 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 MVB12AQ96EY5 273 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 PTCD3Q96EY7 689 aaKnown RBP10.33□□□□□ -0.76
ATG4B-219ENST00000479941 SEC16BQ96JE7 1060 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 EFCAB11Q9BUY7 163 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 GPR87Q9BY21 358 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 NT5DC2Q9H857 520 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 SYNPO2LQ9H987 977 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 AKIRIN1Q9H9L7 192 aaPredicted RBP10.33□□□□□ -0.76
ATG4B-219ENST00000479941 GEMIN8Q9NWZ8 242 aaKnown RBP10.33□□□□□ -0.76
ATG4B-219ENST00000479941 COPG2Q9UBF2 871 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 DHCR7Q9UBM7 475 aaKnown RBP10.33□□□□□ -0.76
ATG4B-219ENST00000479941 NDOR1Q9UHB4 597 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 ZFP69BQ9UJL9 534 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 CROTQ9UKG9 612 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 GRID1Q9ULK0 1009 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 RUVBL1Q9Y265 456 aaKnown RBP10.33□□□□□ -0.76
ATG4B-219ENST00000479941 ASB1Q9Y576 335 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 ANGPTL3Q9Y5C1 460 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 PCDHGA6Q9Y5G7 932 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 FOXO6A8MYZ6 492 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 C9J4A7 227 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 TERTO14746 1132 aaKnown RBP10.32□□□□□ -0.76
ATG4B-219ENST00000479941 P2RX6O15547 441 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 CTIFO43310 598 aaKnown RBP10.32□□□□□ -0.76
ATG4B-219ENST00000479941 WFS1O76024 890 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 ONECUT2O95948 504 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 RAB40ALP0C0E4 278 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 PIM1P11309 404 aaPredicted RBP10.32□□□□□ -0.76
ATG4B-219ENST00000479941 LIFP15018 202 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 EPORP19235 508 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 GSTM2P28161 218 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 CRHR1P34998 444 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 RPS15P62841 145 aaKnown RBP10.32□□□□□ -0.76
ATG4B-219ENST00000479941 NFKB2Q00653 900 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 IRF8Q02556 426 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 ZNF844Q08AG5 666 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 CHIT1Q13231 466 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 DNASE1L3Q13609 305 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 PWP1Q13610 501 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 FAM53BQ14153 422 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 DOC2AQ14183 400 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 SLBPQ14493 270 aaKnown RBP eCLIP10.32□□□□□ -0.76
ATG4B-219ENST00000479941 RBBP5Q15291 538 aaKnown RBP10.32□□□□□ -0.76
ATG4B-219ENST00000479941 HIST2H2ACQ16777 129 aaPredicted RBP10.32□□□□□ -0.76
ATG4B-219ENST00000479941 KRT71Q3SY84 523 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 CCDC153Q494R4 210 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 NKAIN1Q4KMZ8 207 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 XKR6Q5GH73 641 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 BEND6Q5SZJ8 279 aaPredicted RBP10.32□□□□□ -0.76
ATG4B-219ENST00000479941 C1orf189Q5VU69 101 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 HIST2H2AA3Q6FI13 130 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 PRMT9Q6P2P2 845 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 C16orf46Q6P387 395 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 TMIGD1Q6UXZ0 262 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 TRABD2AQ86V40 505 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 SLC22A9Q8IVM8 553 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 C4orf33Q8N1A6 199 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms