RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 POGLUT1Q8NBL1 392 aa15.16■□□□□ 0.02
DDX56-210ENST00000479440 OR9A4Q8NGU2 314 aa15.16■□□□□ 0.02
DDX56-210ENST00000479440 LPAR4Q99677 370 aa15.16■□□□□ 0.02
DDX56-210ENST00000479440 EBNA1BP2Q99848 306 aaKnown RBP15.16■□□□□ 0.02
DDX56-210ENST00000479440 P2RY12Q9H244 342 aa15.16■□□□□ 0.02
DDX56-210ENST00000479440 TCAF1Q9Y4C2 921 aa15.16■□□□□ 0.02
DDX56-210ENST00000479440 SYCE3A1L190 88 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 NKX2-6A6NCS4 301 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 MYO1CO00159 1063 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 HAT1O14929 419 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 KLK2P20151 261 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 RPS3P23396 243 aaKnown RBP eCLIP15.15■□□□□ 0.02
DDX56-210ENST00000479440 PTGER1P34995 402 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 HSD17B2P37059 387 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 ST13P50502 369 aaKnown RBP15.15■□□□□ 0.02
DDX56-210ENST00000479440 GDF10P55107 478 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 ABATP80404 500 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 PRDX1Q06830 199 aaKnown RBP15.15■□□□□ 0.02
DDX56-210ENST00000479440 TFF3Q07654 80 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 LDB1Q86U70 411 aaPredicted RBP15.15■□□□□ 0.02
DDX56-210ENST00000479440 MPP5Q8N3R9 675 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 CPSF7Q8N684 471 aaKnown RBP15.15■□□□□ 0.02
DDX56-210ENST00000479440 PPHLN1Q8NEY8 458 aaKnown RBP15.15■□□□□ 0.02
DDX56-210ENST00000479440 OR51Q1Q8NH59 317 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 LILRB4Q8NHJ6 448 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 RND1Q92730 232 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 TMEM125Q96AQ2 219 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 CALR3Q96L12 384 aaKnown RBP15.15■□□□□ 0.02
DDX56-210ENST00000479440 TP63Q9H3D4 680 aaPredicted RBP15.15■□□□□ 0.02
DDX56-210ENST00000479440 KCNJ16Q9NPI9 418 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 HCN3Q9P1Z3 774 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 TSR3Q9UJK0 312 aaKnown RBP15.15■□□□□ 0.02
DDX56-210ENST00000479440 RNF6Q9Y252 685 aa15.15■□□□□ 0.02
DDX56-210ENST00000479440 R3HDM2Q9Y2K5 976 aaKnown RBP15.15■□□□□ 0.02
DDX56-210ENST00000479440 TMEM200CA6NKL6 621 aa15.14■□□□□ 0.01
DDX56-210ENST00000479440 USP27XA6NNY8 438 aa15.14■□□□□ 0.01
DDX56-210ENST00000479440 NDC80O14777 642 aa15.14■□□□□ 0.01
DDX56-210ENST00000479440 KIF5CO60282 957 aa15.14■□□□□ 0.01
DDX56-210ENST00000479440 MAN1A2O60476 641 aa15.14■□□□□ 0.01
DDX56-210ENST00000479440 NDUFS3O75489 264 aa15.14■□□□□ 0.01
DDX56-210ENST00000479440 MATN4O95460 622 aa15.14■□□□□ 0.01
DDX56-210ENST00000479440 HOXD4P09016 255 aaPredicted RBP15.14■□□□□ 0.01
DDX56-210ENST00000479440 PNLIPRP1P54315 467 aa15.14■□□□□ 0.01
DDX56-210ENST00000479440 EIF3BP55884 814 aaKnown RBP15.14■□□□□ 0.01
DDX56-210ENST00000479440 ACTN3Q08043 901 aaPredicted RBP15.14■□□□□ 0.01
DDX56-210ENST00000479440 USP10Q14694 798 aaKnown RBP15.14■□□□□ 0.01
DDX56-210ENST00000479440 SFT2D3Q587I9 215 aa15.14■□□□□ 0.01
DDX56-210ENST00000479440 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.14■□□□□ 0.01
DDX56-210ENST00000479440 MEI1Q5TIA1 1274 aa15.14■□□□□ 0.01
DDX56-210ENST00000479440 PCGF5Q86SE9 256 aa15.14■□□□□ 0.01
DDX56-210ENST00000479440 MARVELD2Q8N4S9 558 aa15.14■□□□□ 0.01
DDX56-210ENST00000479440 ZNF778Q96MU6 729 aa15.14■□□□□ 0.01
DDX56-210ENST00000479440 PANX2Q96RD6 677 aa15.14■□□□□ 0.01
DDX56-210ENST00000479440 KLF13Q9Y2Y9 288 aaPredicted RBP15.14■□□□□ 0.01
DDX56-210ENST00000479440 ABCA2Q9BZC7 2435 aa15.14■□□□□ 0.01
DDX56-210ENST00000479440 A0A1B0GTH9 108 aa15.13■□□□□ 0.01
DDX56-210ENST00000479440 ARHGEF33A8MVX0 844 aa15.13■□□□□ 0.01
DDX56-210ENST00000479440 E7EVH7 732 aa15.13■□□□□ 0.01
DDX56-210ENST00000479440 CD3EAPO15446 510 aaKnown RBP15.13■□□□□ 0.01
DDX56-210ENST00000479440 CDC40O60508 579 aaKnown RBP eCLIP15.13■□□□□ 0.01
DDX56-210ENST00000479440 TOXO94900 526 aa15.13■□□□□ 0.01
DDX56-210ENST00000479440 CATP04040 527 aaKnown RBP15.13■□□□□ 0.01
DDX56-210ENST00000479440 IL1RNP18510 177 aa15.13■□□□□ 0.01
DDX56-210ENST00000479440 CYB561P49447 251 aa15.13■□□□□ 0.01
DDX56-210ENST00000479440 SLC26A5P58743 744 aa15.13■□□□□ 0.01
DDX56-210ENST00000479440 ABRAXAS2Q15018 415 aa15.13■□□□□ 0.01
DDX56-210ENST00000479440 RNFT1Q5M7Z0 435 aa15.13■□□□□ 0.01
DDX56-210ENST00000479440 AADACL2Q6P093 401 aa15.13■□□□□ 0.01
DDX56-210ENST00000479440 VSTM4Q8IW00 320 aa15.13■□□□□ 0.01
DDX56-210ENST00000479440 CLYBLQ8N0X4 340 aa15.13■□□□□ 0.01
DDX56-210ENST00000479440 CDCP1Q9H5V8 836 aa15.13■□□□□ 0.01
DDX56-210ENST00000479440 CCM2LQ9NUG4 571 aaPredicted RBP15.13■□□□□ 0.01
DDX56-210ENST00000479440 MARCH4Q9P2E8 410 aaPredicted RBP15.13■□□□□ 0.01
DDX56-210ENST00000479440 A0A1B0GTL3 188 aa15.12■□□□□ 0.01
DDX56-210ENST00000479440 H3BMM5 538 aa15.12■□□□□ 0.01
DDX56-210ENST00000479440 PRMT3O60678 531 aa15.12■□□□□ 0.01
DDX56-210ENST00000479440 TFEBP19484 476 aa15.12■□□□□ 0.01
DDX56-210ENST00000479440 IL10P22301 178 aa15.12■□□□□ 0.01
DDX56-210ENST00000479440 TPP2P29144 1249 aaPredicted RBP15.12■□□□□ 0.01
DDX56-210ENST00000479440 FDFT1P37268 417 aa15.12■□□□□ 0.01
DDX56-210ENST00000479440 BCL6P41182 706 aa15.12■□□□□ 0.01
DDX56-210ENST00000479440 MEOX1P50221 254 aa15.12■□□□□ 0.01
DDX56-210ENST00000479440 GBX1Q14549 363 aa15.12■□□□□ 0.01
DDX56-210ENST00000479440 NSDHLQ15738 373 aa15.12■□□□□ 0.01
DDX56-210ENST00000479440 PRSS41Q7RTY9 318 aa15.12■□□□□ 0.01
DDX56-210ENST00000479440 RPS19BP1Q86WX3 136 aaKnown RBP15.12■□□□□ 0.01
DDX56-210ENST00000479440 OTUD6BQ8N6M0 293 aa15.12■□□□□ 0.01
DDX56-210ENST00000479440 MYRIPQ8NFW9 859 aa15.12■□□□□ 0.01
DDX56-210ENST00000479440 NRGNQ92686 78 aa15.12■□□□□ 0.01
DDX56-210ENST00000479440 UCK2Q9BZX2 261 aa15.12■□□□□ 0.01
DDX56-210ENST00000479440 ANKHQ9HCJ1 492 aa15.12■□□□□ 0.01
DDX56-210ENST00000479440 DNHD1Q96M86 4753 aa15.11■□□□□ 0.01
DDX56-210ENST00000479440 MAGEB17A8MXT2 336 aa15.11■□□□□ 0.01
DDX56-210ENST00000479440 AKR1B15C9JRZ8 316 aaPredicted RBP15.11■□□□□ 0.01
DDX56-210ENST00000479440 KLRC4-KLRK1H3BQV0 150 aa15.11■□□□□ 0.01
DDX56-210ENST00000479440 SMAPO00193 183 aa15.11■□□□□ 0.01
DDX56-210ENST00000479440 FCHO1O14526 889 aa15.11■□□□□ 0.01
DDX56-210ENST00000479440 PFDN6O15212 129 aa15.11■□□□□ 0.01
DDX56-210ENST00000479440 PSIP1O75475 530 aaKnown RBP15.11■□□□□ 0.01
DDX56-210ENST00000479440 ANP32AP39687 249 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms