RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 RPS15AP62244 130 aaKnown RBP16.91■□□□□ 0.3
HLA-A-206ENST00000479320 SNRPNP63162 240 aaKnown RBP16.91■□□□□ 0.3
HLA-A-206ENST00000479320 CSNK1G2P78368 415 aa16.91■□□□□ 0.3
HLA-A-206ENST00000479320 FAM53BQ14153 422 aa16.91■□□□□ 0.3
HLA-A-206ENST00000479320 PLEKHN1Q494U1 663 aaPredicted RBP16.91■□□□□ 0.3
HLA-A-206ENST00000479320 HSP90B2PQ58FF3 399 aa16.91■□□□□ 0.3
HLA-A-206ENST00000479320 LCTLQ6UWM7 567 aa16.91■□□□□ 0.3
HLA-A-206ENST00000479320 TMEM207Q6UWW9 146 aa16.91■□□□□ 0.3
HLA-A-206ENST00000479320 VN1R4Q7Z5H5 301 aa16.91■□□□□ 0.3
HLA-A-206ENST00000479320 STRA8Q7Z7C7 330 aa16.91■□□□□ 0.3
HLA-A-206ENST00000479320 C17orf64Q86WR6 236 aa16.91■□□□□ 0.3
HLA-A-206ENST00000479320 PARP9Q8IXQ6 854 aa16.91■□□□□ 0.3
HLA-A-206ENST00000479320 EFCAB3Q8N7B9 438 aa16.91■□□□□ 0.3
HLA-A-206ENST00000479320 BBOF1Q8ND07 529 aa16.91■□□□□ 0.3
HLA-A-206ENST00000479320 PDLIM5Q96HC4 596 aaKnown RBP16.91■□□□□ 0.3
HLA-A-206ENST00000479320 MYCBPQ99417 103 aaPredicted RBP16.91■□□□□ 0.3
HLA-A-206ENST00000479320 ERP44Q9BS26 406 aa16.91■□□□□ 0.3
HLA-A-206ENST00000479320 DRC3Q9H069 523 aa16.91■□□□□ 0.3
HLA-A-206ENST00000479320 ZBTB20Q9HC78 741 aaPredicted RBP16.91■□□□□ 0.3
HLA-A-206ENST00000479320 ARL15Q9NXU5 204 aa16.91■□□□□ 0.3
HLA-A-206ENST00000479320 C3orf18Q9UK00 162 aa16.91■□□□□ 0.3
HLA-A-206ENST00000479320 MRPS2Q9Y399 296 aaKnown RBP16.91■□□□□ 0.3
HLA-A-206ENST00000479320 COL12A1Q99715 3063 aa16.91■□□□□ 0.3
HLA-A-206ENST00000479320 RP1L1Q8IWN7 2480 aaPredicted RBP16.9■□□□□ 0.3
HLA-A-206ENST00000479320 SCN3AQ9NY46 2000 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 FEZF1A0PJY2 475 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 FAM187AA6NFU0 413 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 NDC80O14777 642 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 LCMT2O60294 686 aaKnown RBP16.9■□□□□ 0.3
HLA-A-206ENST00000479320 ANXA5P08758 320 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 AP1S2P56377 157 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 INPP5JQ15735 1006 aaPredicted RBP16.9■□□□□ 0.3
HLA-A-206ENST00000479320 NDUFA9Q16795 377 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 WHAMMP3Q1A5X7 153 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 ATG9BQ674R7 924 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 DUPD1Q68J44 220 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 CAPN13Q6MZZ7 669 aaPredicted RBP16.9■□□□□ 0.3
HLA-A-206ENST00000479320 SLC26A11Q86WA9 606 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 ZC3HC1Q86WB0 502 aaKnown RBP16.9■□□□□ 0.3
HLA-A-206ENST00000479320 ZBED8Q8IZ13 594 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 PYCR2Q96C36 320 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 C8orf44Q96CB5 159 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 VPS50Q96JG6 964 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 MACROD1Q9BQ69 325 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 TRIM54Q9BYV2 358 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 TGIF2Q9GZN2 237 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 DPH5Q9H2P9 285 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 IKZF3Q9UKT9 509 aa16.9■□□□□ 0.3
HLA-A-206ENST00000479320 HECTD1Q9ULT8 2610 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 PABPN1LA6NDY0 278 aaKnown RBP16.89■□□□□ 0.29
HLA-A-206ENST00000479320 RAD51CO43502 376 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 VPS4BO75351 444 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 CDH1P12830 882 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 SAT1P21673 171 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 EMP2P54851 167 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 SRSF1Q07955 248 aaKnown RBP eCLIP16.89■□□□□ 0.29
HLA-A-206ENST00000479320 Q0VFX4 171 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 SYT16Q17RD7 645 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 PRR30Q53SZ7 412 aaPredicted RBP16.89■□□□□ 0.29
HLA-A-206ENST00000479320 BEND6Q5SZJ8 279 aaPredicted RBP16.89■□□□□ 0.29
HLA-A-206ENST00000479320 MAATS1Q7Z4T9 603 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 OR56A3Q8NH54 315 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 FBXL8Q96CD0 374 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 TM4SF19Q96DZ7 209 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 THAP11Q96EK4 314 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 HAUS8Q9BT25 410 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 MKKSQ9NPJ1 570 aaPredicted RBP16.89■□□□□ 0.29
HLA-A-206ENST00000479320 WHRNQ9P202 907 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 VPS4AQ9UN37 437 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 B3GNT3Q9Y2A9 372 aa16.89■□□□□ 0.29
HLA-A-206ENST00000479320 DOPEY2Q9Y3R5 2298 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 FAM95CA0A1B0GW59 222 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 CLEC18AA5D8T8 446 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 IDSB3KWA1 339 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 GUCA1CO95843 209 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 HPP00738 406 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 ENO2P09104 434 aaPredicted RBP16.88■□□□□ 0.29
HLA-A-206ENST00000479320 ACPPP15309 386 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 ZNF37AP17032 561 aaPredicted RBP16.88■□□□□ 0.29
HLA-A-206ENST00000479320 BCL6P41182 706 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 AVPR1BP47901 424 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 MAT1AQ00266 395 aaKnown RBP16.88■□□□□ 0.29
HLA-A-206ENST00000479320 C2orf54Q08AI8 447 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 CALCOCO2Q13137 446 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 UBAP2LQ14157 1087 aaKnown RBP16.88■□□□□ 0.29
HLA-A-206ENST00000479320 SBSNQ6UWP8 590 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 CLEC18BQ6UXF7 455 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 CAPN12Q6ZSI9 719 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 C10orf67Q8IYJ2 551 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 ZADH2Q8N4Q0 377 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 CLEC18CQ8NCF0 446 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 GALNT11Q8NCW6 608 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 OR9A4Q8NGU2 314 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 PYROXD1Q8WU10 500 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 TM9SF4Q92544 642 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 THOC3Q96J01 351 aaKnown RBP16.88■□□□□ 0.29
HLA-A-206ENST00000479320 OR4K3Q96R72 315 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 MCMBPQ9BTE3 642 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 LHPPQ9H008 270 aa16.88■□□□□ 0.29
HLA-A-206ENST00000479320 ZNF160Q9HCG1 818 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms