RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 AGBL3Q8NEM8 1001 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 TBC1D20Q96BZ9 403 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 BRD7Q9NPI1 651 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 ZNF222Q9UK12 451 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 SOWAHBA6NEL2 793 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 FAM220BPB1ANY3 271 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 INMT-MINDY4F8WBC2 141 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 CDRT1O95170 752 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 F8A1P23610 371 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 ADRA1AP35348 466 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 ARSDP51689 593 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 ADIGQ0VDE8 80 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 GHDCQ8N2G8 530 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 EMID1Q96A84 441 aaPredicted RBP20.55■□□□□ 0.88
SDF4-206ENST00000478938 EXOC2Q96KP1 924 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 SORBS1Q9BX66 1292 aaKnown RBP20.55■□□□□ 0.88
SDF4-206ENST00000478938 CLEC4MQ9H2X3 399 aaPredicted RBP20.55■□□□□ 0.88
SDF4-206ENST00000478938 PIGUQ9H490 435 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 B3GAT2Q9NPZ5 323 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 SLAMF7Q9NQ25 335 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 A0A1W2PPL8 197 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 HNRNPCL2B2RXH8 293 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 SLC7A4O43246 635 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 ECI2O75521 394 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 FABP3P05413 133 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 PRKAR1AP10644 381 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 FDXRP22570 491 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 AKT1P31749 480 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 TARBP2Q15633 366 aaKnown RBP20.54■□□□□ 0.88
SDF4-206ENST00000478938 FRMPD2BQ6IN97 320 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 FAM196AQ6ZSG2 479 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 OR6B3Q8NGW1 331 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.54■□□□□ 0.88
SDF4-206ENST00000478938 CREB3L4Q8TEY5 395 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 NPY6RQ99463 290 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 GABARAPL3Q9BY60 117 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 REEP1Q9H902 201 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 SPATA6Q9NWH7 488 aaPredicted RBP20.54■□□□□ 0.88
SDF4-206ENST00000478938 HPF1Q9NWY4 346 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 LTBP1Q14766 1721 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 NRXN2Q9P2S2 1712 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 A0A1B0GVM2 712 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 hCG_1807616A0A1W2PRN6 198 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 IL1RNP18510 177 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 RAB3AP20336 220 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 TMEM132DQ14C87 1099 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 IL27RAQ6UWB1 636 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 LILRB2Q8N423 598 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 C3orf58Q8NDZ4 430 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 OR52B6Q8NGF0 335 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 SECISBP2Q96T21 854 aaKnown RBP20.54■□□□□ 0.88
SDF4-206ENST00000478938 GHITMQ9H3K2 345 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 MINDY3Q9H8M7 445 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 GLOD4Q9HC38 313 aa20.54■□□□□ 0.88
SDF4-206ENST00000478938 SLC22A23A1A5C7 686 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 PPEF2O14830 753 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 AKAP8O43823 692 aaKnown RBP20.53■□□□□ 0.88
SDF4-206ENST00000478938 NPM3O75607 178 aaKnown RBP20.53■□□□□ 0.88
SDF4-206ENST00000478938 ANXA9O76027 345 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 OR5F1O95221 314 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 LHCGRP22888 699 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 AGFG1P52594 562 aaKnown RBP20.53■□□□□ 0.88
SDF4-206ENST00000478938 TSNQ15631 228 aaKnown RBP20.53■□□□□ 0.88
SDF4-206ENST00000478938 SNAPC1Q16533 368 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 RTL4Q6ZR62 310 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 GPRIN3Q6ZVF9 776 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 HFE2Q6ZVN8 426 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 OTOP2Q7RTS6 562 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 Q8N402 240 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 SLC22A8Q8TCC7 542 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 PPP1R2P1Q96PQ5 205 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 PCTPQ9UKL6 214 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 ZNF670-ZNF695F2Z2N8 137 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 CACNG3O60359 315 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 CELF2O95319 508 aaKnown RBP20.53■□□□□ 0.88
SDF4-206ENST00000478938 HRGP04196 525 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 GZMMP51124 257 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 AP5B1Q2VPB7 878 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 MILR1Q7Z6M3 343 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 CALHM3Q86XJ0 350 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 PM20D2Q8IYS1 436 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 KRTCAP2Q8N6L1 136 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 TMEM145Q8NBT3 493 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 UTP15Q8TED0 518 aaKnown RBP20.53■□□□□ 0.88
SDF4-206ENST00000478938 USP7Q93009 1102 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 ULK4Q96C45 1275 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 PRKD2Q9BZL6 878 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 SLC6A15Q9H2J7 730 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 RERGLQ9H628 205 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 SDHAF2Q9NX18 166 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 REV1Q9UBZ9 1251 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 PCDHGA9Q9Y5G4 932 aaKnown RBP20.53■□□□□ 0.88
SDF4-206ENST00000478938 BRWD3Q6RI45 1802 aa20.53■□□□□ 0.88
SDF4-206ENST00000478938 A0A0A6YYJ9 748 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 PRSS44E7EML9 344 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 TREHO43280 583 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 MAFO75444 373 aaPredicted RBP20.52■□□□□ 0.88
SDF4-206ENST00000478938 PSIP1O75475 530 aaKnown RBP20.52■□□□□ 0.88
SDF4-206ENST00000478938 AP2A2O94973 939 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 CKMT1AP12532 417 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms