RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 MEX3AA1L020 520 aaKnown RBP3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 OR2A25A4D2G3 310 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 MYADML2A6NDP7 307 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 OR5K3A6NET4 321 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 PRSS29PA6NIE9 313 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 UNC119BA6NIH7 251 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 ANXA2P2A6NMY6 339 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 C4orf47A7E2U8 309 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 BECN2A8MW95 431 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 TMEM114B3SHH9 223 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 E5RI56 91 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 CES2O00748 559 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 TNPO2O14787 897 aaKnown RBP3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 SMAD9O15198 467 aaKnown RBP3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 TOX3O15405 576 aaPredicted RBP3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 SUV39H1O43463 412 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 B4GAT1O43505 415 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 CHMP2AO43633 222 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 MGRN1O60291 552 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 UGDHO60701 494 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 ATP9AO75110 1047 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 DNAJB6O75190 326 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 NDUFS6O75380 124 aaKnown RBP3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 SERPINB7O75635 380 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 OR6B1O95007 311 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 ZFYVE9O95405 1425 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 NTSR2O95665 410 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 NDST3O95803 873 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 GLP2RO95838 553 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 MT-ND5P03915 603 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 GPIP06744 558 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 FABP1P07148 127 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 PLEKP08567 350 aaPredicted RBP3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 STSP08842 583 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 SLC35E2BP0CK96 405 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 SLC35E2P0CK97 266 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 C8orf89P0DMQ9 161 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 UCP1P25874 307 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 GNA11P29992 359 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 CCND3P30281 292 aaPredicted RBP3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 SOAT1P35610 550 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 NUDT1P36639 197 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 PGM1P36871 562 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 SYKP43405 635 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 CDK7P50613 346 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF135P52742 658 aaPredicted RBP3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 ARFIP2P53365 341 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 PSMD4P55036 377 aaKnown RBP3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 CDH8P55286 799 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 UCP2P55851 309 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 SUMO3P55854 103 aaPredicted RBP3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 SOX8P57073 446 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 DAOAP59103 153 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 ACTBP60709 375 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 ST8SIA6P61647 398 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 ACTA2P62736 377 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 ACTG1P63261 375 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 ACTG2P63267 376 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 ACTC1P68032 377 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 ACTA1P68133 377 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 POU6F2P78424 691 aaPredicted RBP3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 BLOC1S1P78537 153 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 MRPS25P82663 173 aaKnown RBP3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 LRRC63Q05C16 580 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 TGM3Q08188 693 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 SCAPQ12770 1279 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 SPP2Q13103 211 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 DIP2AQ14689 1571 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 HEPACAMQ14CZ8 416 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 PGM5Q15124 567 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 ANGPT1Q15389 498 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 MLIPQ5VWP3 458 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 LRRC66Q68CR7 880 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 WBP2NLQ6ICG8 309 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 SLC25A25Q6KCM7 469 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 HMBOX1Q6NT76 420 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 TAPT1Q6NXT6 567 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 C3orf33Q6P1S2 294 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 KLHL35Q6PF15 583 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 PAQR9Q6ZVX9 377 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 TRILQ7L0X0 811 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 CHST9Q7L1S5 443 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 NDUFAF7Q7L592 441 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 CLNKQ7Z7G1 428 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 LINC00523Q86TU6 105 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 ITIH5Q86UX2 942 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF410Q86VK4 478 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 IQCHQ86VS3 1027 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 CCDC60Q8IWA6 550 aaPredicted RBP3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 NALCNQ8IZF0 1738 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 XRN1Q8IZH2 1706 aaKnown RBP3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM58AQ8N1B3 248 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 CFAP52Q8N1V2 620 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 MINDY1Q8N5J2 469 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 PCDH20Q8N6Y1 951 aaKnown RBP3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 AMER2Q8N7J2 671 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 FADS6Q8N9I5 356 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM47BQ8NA70 645 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 LEMD2Q8NC56 503 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms