RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 ACADLP28330 430 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 PIK3CBP42338 1070 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 CDH15P55291 814 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 SLC14A1Q13336 389 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 TUBA3CQ13748 450 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 GTF2H3Q13889 308 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 PDE7AQ13946 482 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 C11orf91Q3C1V1 193 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 OTUD3Q5T2D3 398 aaPredicted RBP11.78□□□□□ -0.52
PTPRF-212ENST00000477970 ADAMTSL4Q6UY14 1074 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 ANKRD46Q86W74 232 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 HUS1BQ8NHY5 278 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 MTERF3Q96E29 417 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 MED8Q96G25 268 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 COX14Q96I36 57 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 FAM129BQ96TA1 746 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 EBPLQ9BY08 206 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 ZNF282Q9UDV7 671 aaPredicted RBP11.78□□□□□ -0.52
PTPRF-212ENST00000477970 ITM2BQ9Y287 266 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 TRANK1O15050 2925 aa11.78□□□□□ -0.52
PTPRF-212ENST00000477970 CROCCQ5TZA2 2017 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 CCDC160A6NGH7 325 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 DNAJB5O75953 348 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 C1GALT1C1LP0DN25 315 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 ERGP11308 486 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 PCNAP12004 261 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 C6P13671 934 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 NPPBP16860 134 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 IDSP22304 550 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 PDHA2P29803 388 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 RXRGP48443 463 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 TBPL1P62380 186 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 PDGFRLQ15198 375 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 OFCC1Q8IZS5 231 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 UBE2E3Q969T4 207 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 ASB16Q96NS5 453 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 DYRK1BQ9Y463 629 aa11.77□□□□□ -0.52
PTPRF-212ENST00000477970 DNMT3AQ9Y6K1 912 aaPredicted RBP11.77□□□□□ -0.52
PTPRF-212ENST00000477970 LRATO95237 230 aa11.77□□□□□ -0.53
PTPRF-212ENST00000477970 SHMT2P34897 504 aa11.77□□□□□ -0.53
PTPRF-212ENST00000477970 RBBP5Q15291 538 aaKnown RBP11.77□□□□□ -0.53
PTPRF-212ENST00000477970 FNDC3BQ53EP0 1204 aaKnown RBP11.77□□□□□ -0.53
PTPRF-212ENST00000477970 CPTPQ5TA50 214 aa11.77□□□□□ -0.53
PTPRF-212ENST00000477970 LILRA3Q8N6C8 439 aaPredicted RBP11.77□□□□□ -0.53
PTPRF-212ENST00000477970 NEIL2Q969S2 332 aa11.77□□□□□ -0.53
PTPRF-212ENST00000477970 DEC1Q9P2X7 70 aa11.77□□□□□ -0.53
PTPRF-212ENST00000477970 NAALAD2Q9Y3Q0 740 aa11.77□□□□□ -0.53
PTPRF-212ENST00000477970 C2orf16Q68DN1 1984 aa11.77□□□□□ -0.53
PTPRF-212ENST00000477970 KLHL33A6NCF5 533 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 KRT87PA6NCN2 255 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 E9PQ18 207 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 GNGT2O14610 69 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 ETHE1O95571 254 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 CLIC3O95833 236 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 GSNP06396 782 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 MYCLP1P12525 358 aaPredicted RBP11.76□□□□□ -0.53
PTPRF-212ENST00000477970 TEAD1P28347 426 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 KDELR2P33947 212 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 RAD23AP54725 363 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 AGERQ15109 404 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 SKIV2LQ15477 1246 aaKnown RBP11.76□□□□□ -0.53
PTPRF-212ENST00000477970 ZNF691Q5VV52 312 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 LCTLQ6UWM7 567 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 DSG4Q86SJ6 1040 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 ZDHHC21Q8IVQ6 265 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 NPAS3Q8IXF0 933 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 C1orf52Q8N6N3 182 aaKnown RBP11.76□□□□□ -0.53
PTPRF-212ENST00000477970 SMG7Q92540 1137 aaKnown RBP11.76□□□□□ -0.53
PTPRF-212ENST00000477970 ISOC1Q96CN7 298 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 MTERF1Q99551 399 aaKnown RBP11.76□□□□□ -0.53
PTPRF-212ENST00000477970 WRAP53Q9BUR4 548 aaKnown RBP11.76□□□□□ -0.53
PTPRF-212ENST00000477970 AMBRA1Q9C0C7 1298 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 TMEFF2Q9UIK5 374 aaPredicted RBP11.76□□□□□ -0.53
PTPRF-212ENST00000477970 TCF20Q9UGU0 1960 aaKnown RBP11.76□□□□□ -0.53
PTPRF-212ENST00000477970 MGAT4DA6NG13 374 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 GABRR3A8MPY1 467 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 ANXA4P09525 319 aaPredicted RBP11.76□□□□□ -0.53
PTPRF-212ENST00000477970 CRHBPP24387 322 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 PCGF2P35227 344 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 GPR1P46091 355 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 VAC14Q08AM6 782 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 ZNF763Q0D2J5 394 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 BROXQ5VW32 411 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 IKBIPQ70UQ0 350 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 R3HCC1LQ7Z5L2 792 aaKnown RBP11.76□□□□□ -0.53
PTPRF-212ENST00000477970 ZFP90Q8TF47 636 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 SMARCD2Q92925 531 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 HIC2Q96JB3 615 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 MYNNQ9NPC7 610 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 DMRT3Q9NQL9 472 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 ATXN10Q9UBB4 475 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 UTS2RQ9UKP6 389 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 RFXAPO00287 272 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 ABCB7O75027 752 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 LAMP1P11279 417 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 NUP107P57740 925 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 PHEXP78562 749 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 KEAP1Q14145 624 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 ARHGAP19Q14CB8 494 aa11.76□□□□□ -0.53
PTPRF-212ENST00000477970 HIST2H2ACQ16777 129 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms