RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 OCIAD1Q9NX40 245 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 PISDQ9UG56 409 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 SATB2Q9UPW6 733 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 TRBC2A0A5B9 178 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 HCRTR1O43613 425 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 UGDHO60701 494 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 CCL4P13236 92 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 CHN1P15882 459 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 CXCR2P25025 360 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 BCL6P41182 706 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 GABRA4P48169 554 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 RPS15AP62244 130 aaKnown RBP14.66□□□□□ -0.06
SEC13-215ENST00000477547 TBCCQ15814 346 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 GPRIN3Q6ZVF9 776 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 KRT78Q8N1N4 520 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 DNAJC22Q8N4W6 341 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 BMPERQ8N8U9 685 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 ZNF740Q8NDX6 193 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 OR4K1Q8NGD4 311 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 CDK15Q96Q40 435 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 OR6C1Q96RD1 312 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 DRC3Q9H069 523 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 IRAK4Q9NWZ3 460 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 PILRAQ9UKJ1 303 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 PLCL2Q9UPR0 1127 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 PCDHGA4Q9Y5G9 962 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 URB1O60287 2271 aaKnown RBP14.66□□□□□ -0.06
SEC13-215ENST00000477547 SDK2Q58EX2 2172 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 A0A1W2PNU3 283 aaPredicted RBP14.66□□□□□ -0.06
SEC13-215ENST00000477547 CYSRT1A8MQ03 144 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 B4E171 279 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 OR1F1O43749 312 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 NPHS1O60500 1241 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 CLDN9O95484 217 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 SERPINE1P05121 402 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 MSL3P1P0C860 447 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 BGNP21810 368 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 ETV5P41161 510 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 HNF4AP41235 474 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 TSPAN7P41732 249 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 CCR10P46092 362 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 MAPK10P53779 464 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 CYP4F2P78329 520 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 GABREP78334 506 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 PCDH1Q08174 1060 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 LAPTM5Q13571 262 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 E2F2Q14209 437 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 RCN2Q14257 317 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 GGTA1PQ4G0N0 100 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 FRMPD2BQ6IN97 320 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 LETMD1Q6P1Q0 360 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 SYVN1Q86TM6 617 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.66□□□□□ -0.065e-6■■■■■ 55.7
SEC13-215ENST00000477547 OR4F6Q8NGB9 312 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 AGAP11Q8TF27 550 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 RERGQ96A58 199 aaPredicted RBP14.66□□□□□ -0.06
SEC13-215ENST00000477547 ZNF501Q96CX3 271 aaPredicted RBP14.66□□□□□ -0.06
SEC13-215ENST00000477547 PRR11Q96HE9 360 aaPredicted RBP14.66□□□□□ -0.06
SEC13-215ENST00000477547 TRMOQ9BU70 441 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 NTMT1Q9BV86 223 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 SYNPO2LQ9H987 977 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 PRM3Q9NNZ6 103 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 MID1IP1Q9NPA3 183 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 TRPS1Q9UHF7 1281 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 RARRES3Q9UL19 164 aa14.66□□□□□ -0.06
SEC13-215ENST00000477547 A0A1B0GTL3 188 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 PPP6CO00743 305 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 WFS1O76024 890 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 OR4F21O95013 312 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 STATHP02808 62 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 SERPINB5P36952 375 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 CASP2P42575 452 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 SCTRP47872 440 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 ATP1A2P50993 1020 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 PKNOX1P55347 436 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 ITGA1P56199 1179 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 VSX2P58304 361 aaPredicted RBP14.65□□□□□ -0.06
SEC13-215ENST00000477547 RAB15P59190 212 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 ERVPABLB-1P60509 514 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 MC2RQ01718 297 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 RELAQ04206 551 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 RBBP5Q15291 538 aaKnown RBP14.65□□□□□ -0.06
SEC13-215ENST00000477547 HIST2H2ACQ16777 129 aaPredicted RBP14.65□□□□□ -0.06
SEC13-215ENST00000477547 LIPJQ5W064 366 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 HIST2H2AA3Q6FI13 130 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 MED27Q6P2C8 311 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 TMIGD1Q6UXZ0 262 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 MILR1Q7Z6M3 343 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 MCATQ8IVS2 390 aaKnown RBP14.65□□□□□ -0.06
SEC13-215ENST00000477547 L3MBTL4Q8NA19 623 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 MFSD9Q8NBP5 474 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 OR1L3Q8NH93 324 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 DYDC1Q8WWB3 177 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 PMEPA1Q969W9 287 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 THAP11Q96EK4 314 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 MAGEB10Q96LZ2 347 aaPredicted RBP14.65□□□□□ -0.06
SEC13-215ENST00000477547 OR2A5Q96R48 311 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 SHCBP1LQ9BZQ2 653 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 PITHD1Q9GZP4 211 aaPredicted RBP14.65□□□□□ -0.06
SEC13-215ENST00000477547 APMAPQ9HDC9 416 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms