RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 PPP2R2AP63151 447 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 SNX1Q13596 522 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 ABRAXAS2Q15018 415 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 TESK1Q15569 626 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 NSDHLQ15738 373 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 EXT1Q16394 746 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 KLHL38Q2WGJ6 581 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 SFT2D3Q587I9 215 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 PLAG1Q6DJT9 500 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 PAPD4Q6PIY7 484 aaKnown RBP6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 PRSS41Q7RTY9 318 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 ANKRD37Q7Z713 158 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 SDCCAG8Q86SQ7 713 aaPredicted RBP6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 KIAA1328Q86T90 577 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 PRUNE1Q86TP1 453 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 CD163Q86VB7 1156 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 DOLPP1Q86YN1 238 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 CCDC89Q8N998 374 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 RNF214Q8ND24 703 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 MDS2Q8NDY4 140 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 OR51Q1Q8NH59 317 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 HMGCLL1Q8TB92 370 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 NRGNQ92686 78 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 TMEM125Q96AQ2 219 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 ALKBH8Q96BT7 664 aaKnown RBP6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 POM121Q96HA1 1249 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 PKP4Q99569 1192 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 LPAR4Q99677 370 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 EBNA1BP2Q99848 306 aaKnown RBP6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 MACROD1Q9BQ69 325 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 TGIF2Q9GZN2 237 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 CDCP1Q9H5V8 836 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 SYNPO2LQ9H987 977 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 ANKHQ9HCJ1 492 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 CHRAC1Q9NRG0 131 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 RAB6BQ9NRW1 208 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 ZNF148Q9UQR1 794 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 ZNF835Q9Y2P0 537 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 CRYL1Q9Y2S2 319 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 KLK4Q9Y5K2 254 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 DUSP10Q9Y6W6 482 aa6.3□□□□□ -1.4
RTFDC1-206ENST00000477485 ARHGAP21Q5T5U3 1957 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 IGKV1-8A0A0C4DH67 115 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 A0A1B0GTH9 108 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 TCRBV7S2A1N4TA0A589 114 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 ZNF860A6NHJ4 632 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 USP27XA6NNY8 438 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 FOXO6A8MYZ6 492 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 E9PLN8 166 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 H7BY64 318 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 PRMT3O60678 531 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 RDH16O75452 317 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 PDE9AO76083 593 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 VAPBO95292 243 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 FTCDO95954 541 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 SERPIND1P05546 499 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 ETS1P14921 441 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 NMBRP28336 390 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 PTGS2P35354 604 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 AGTR2P50052 363 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 MEOX1P50221 254 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 OR4D2P58180 307 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 BASP1P80723 227 aaKnown RBP6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 ACVR1Q04771 509 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 PRDX1Q06830 199 aaKnown RBP6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 CUL1Q13616 776 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 PTK6Q13882 451 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 FAM53BQ14153 422 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 PCID2Q5JVF3 399 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 CTSL3PQ5NE16 218 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 SEL1L2Q5TEA6 688 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 SLC25A25Q6KCM7 469 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 MRNIPQ6NTE8 343 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 CES3Q6UWW8 571 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 Q6ZPB1 254 aaPredicted RBP6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 LRRC6Q86X45 466 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 KLHDC8BQ8IXV7 354 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 CCDC170Q8IYT3 715 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 SHISA5Q8N114 240 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 KIF2BQ8N4N8 673 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 M1APQ8TC57 530 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 PHF10Q8WUB8 498 aaKnown RBP6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 SCMH1Q96GD3 660 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 PEX11GQ96HA9 241 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 PRAP1Q96NZ9 151 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 OR2A5Q96R48 311 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 VKORC1Q9BQB6 163 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 TRIM51Q9BSJ1 452 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 UCK2Q9BZX2 261 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 ENKD1Q9H0I2 346 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 P2RY12Q9H244 342 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 ENAMQ9NRM1 1142 aa6.29□□□□□ -1.4
RTFDC1-206ENST00000477485 ZFHX3Q15911 3703 aa6.28□□□□□ -1.4
RTFDC1-206ENST00000477485 MTORP42345 2549 aa6.28□□□□□ -1.4
RTFDC1-206ENST00000477485 FEZF1A0PJY2 475 aa6.28□□□□□ -1.4
RTFDC1-206ENST00000477485 GRID2IPA4D2P6 1211 aa6.28□□□□□ -1.4
RTFDC1-206ENST00000477485 CTAGE9A4FU28 777 aa6.28□□□□□ -1.4
RTFDC1-206ENST00000477485 ASPDHA6ND91 283 aa6.28□□□□□ -1.4
RTFDC1-206ENST00000477485 A8MUA0 341 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms