RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 MAP2K4P45985 399 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 CTSCP53634 463 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 PTPN5P54829 565 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 CDK6Q00534 326 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 HEPACAMQ14CZ8 416 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 CEACAM20Q6UY09 585 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 HACD2Q6Y1H2 254 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 HSD11B1LQ7Z5J1 315 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 TMEM126BQ8IUX1 230 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 ANKFN1Q8N957 763 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 KCT2Q8NC54 265 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 JPH3Q8WXH2 748 aaPredicted RBP10.67□□□□□ -0.7
COL27A1-204ENST00000477421 TP53INP1Q96A56 240 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 TMEM245Q9H330 911 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 GULP1Q9UBP9 304 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 GTF2A1LQ9UNN4 478 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 NCKAP1Q9Y2A7 1128 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 PCDHGB3Q9Y5G1 929 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 TARM1B6A8C7 271 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 CACNB4O00305 520 aaPredicted RBP10.67□□□□□ -0.7
COL27A1-204ENST00000477421 UGT2B17O75795 530 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 RASGRP1O95267 797 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 CBSLP0DN79 551 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 CTSEP14091 401 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 EPCAMP16422 314 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 ZNF30P17039 623 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 DNAJA1P31689 397 aaKnown RBP10.67□□□□□ -0.7
COL27A1-204ENST00000477421 PTGER1P34995 402 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 CBSP35520 551 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 FBXW4P57775 412 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 PMS2P3Q13401 168 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 KLHL12Q53G59 568 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 ZNF783Q6ZMS7 281 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 LILRA3Q8N6C8 439 aaPredicted RBP10.67□□□□□ -0.7
COL27A1-204ENST00000477421 HUS1BQ8NHY5 278 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 RAB2BQ8WUD1 216 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 C1GALT1C1Q96EU7 318 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 ZNF641Q96N77 438 aaPredicted RBP10.67□□□□□ -0.7
COL27A1-204ENST00000477421 EFCAB11Q9BUY7 163 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 ACPTQ9BZG2 426 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 C11orf49Q9H6J7 331 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 SLC28A3Q9HAS3 691 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 CCNB1IP1Q9NPC3 277 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 TVP23BQ9NYZ1 205 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 TRPS1Q9UHF7 1281 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 ZNF831Q5JPB2 1677 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 BRWD1Q9NSI6 2320 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 TCRBV3S1A0A5B6 114 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 FADS2P1A8MWK0 482 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 ZNF99A8MXY4 864 aaPredicted RBP10.66□□□□□ -0.7
COL27A1-204ENST00000477421 C8BP07358 591 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 ETFAP13804 333 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 FEN1P39748 380 aaKnown RBP10.66□□□□□ -0.7
COL27A1-204ENST00000477421 RXRGP48443 463 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 TAS2R41P59536 307 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 VBP1P61758 197 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 TARDBPQ13148 414 aaKnown RBP eCLIP10.66□□□□□ -0.7
COL27A1-204ENST00000477421 NFE2L1Q14494 772 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 VMACQ2NL98 169 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 ZNF805Q5CZA5 627 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 CATSPEREQ5SY80 951 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 C6orf141Q5SZD1 244 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 RNF111Q6ZNA4 994 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 GALNT13Q8IUC8 556 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 UBE2J2Q8N2K1 259 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 TMEM102Q8N9M5 508 aaPredicted RBP10.66□□□□□ -0.7
COL27A1-204ENST00000477421 ZNF696Q9H7X3 374 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 TRIM39Q9HCM9 518 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 ZDHHC7Q9NXF8 308 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 FAM25AB3EWG3 89 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 FAM25CB3EWG5 89 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 FAM25GB3EWG6 89 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 VIPP01282 170 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 PDHA2P29803 388 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 NRIP1P48552 1158 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 RPS6KA3P51812 740 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 TBPL1P62380 186 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 TEAD4Q15561 434 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 SNAPC1Q16533 368 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 CYBRD1Q53TN4 286 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 CMPK2Q5EBM0 449 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 DCST1Q5T197 706 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 NEK5Q6P3R8 708 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 PELI3Q8N2H9 469 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 OR8J3Q8NGG0 315 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 BPIFB1Q8TDL5 484 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 LCN9Q8WX39 176 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 MAELQ96JY0 434 aaKnown RBP10.66□□□□□ -0.7
COL27A1-204ENST00000477421 C1QTNF7Q9BXJ2 289 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 KCNH6Q9H252 994 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 TRIT1Q9H3H1 467 aaKnown RBP10.66□□□□□ -0.7
COL27A1-204ENST00000477421 ZNF282Q9UDV7 671 aaPredicted RBP10.66□□□□□ -0.7
COL27A1-204ENST00000477421 ENOPH1Q9UHY7 261 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 MRPS7Q9Y2R9 242 aaKnown RBP10.66□□□□□ -0.7
COL27A1-204ENST00000477421 COL11A1P12107 1806 aaPredicted RBP10.66□□□□□ -0.7
COL27A1-204ENST00000477421 GREB1LQ9C091 1923 aaPredicted RBP10.66□□□□□ -0.7
COL27A1-204ENST00000477421 TRBC2A0A5B9 178 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 SMIM30A4D0T7 59 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 ERI3O43414 337 aaKnown RBP10.66□□□□□ -0.7
COL27A1-204ENST00000477421 GUCY1B2O75343 617 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms