RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TSNARE1Q96NA8 513 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 OR2A5Q96R48 311 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 CMKLR1Q99788 373 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 SH3GL2Q99962 352 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 ARHGAP9Q9BRR9 750 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 C1QTNF3Q9BXJ4 246 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 DPH1Q9BZG8 443 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 STRADBQ9C0K7 418 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 AICDAQ9GZX7 198 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 SPRTNQ9H040 489 aaPredicted RBP6.69□□□□□ -1.34
LIMD1-204ENST00000474665 ZMYND15Q9H091 742 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 PCBD2Q9H0N5 130 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 EPN3Q9H201 632 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 MRPS30Q9NP92 439 aaKnown RBP6.69□□□□□ -1.34
LIMD1-204ENST00000474665 FBXO8Q9NRD0 319 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 ENAMQ9NRM1 1142 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 FGF21Q9NSA1 209 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 WWOXQ9NZC7 414 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 FOXJ2Q9P0K8 574 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 DCDC2Q9UHG0 476 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 ZNF225Q9UK10 706 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 PCTPQ9UKL6 214 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 PCDHGA8Q9Y5G5 932 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 B3GALT1Q9Y5Z6 326 aa6.69□□□□□ -1.34
LIMD1-204ENST00000474665 DOCK10Q96BY6 2186 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 CROCCQ5TZA2 2017 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 KCNE1BA0A087WTH5 132 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 A0A0J9YVX5 310 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 FEZF1A0PJY2 475 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 ZNF839A8K0R7 811 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 SYCE1LA8MT33 242 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 TMEM150CB9EJG8 249 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 E7EQ34 232 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 H0YGG7 62 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 STX16-NPEPL1H3BU86 382 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 COPEO14579 308 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 OR7A17O14581 309 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 STX16O14662 325 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 GLRA3O75311 464 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 IPO13O94829 963 aaKnown RBP6.68□□□□□ -1.34
LIMD1-204ENST00000474665 TNFSF15O95150 251 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 STATHP02808 62 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 DHRS4L1P0CG22 281 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 FGF5P12034 268 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 GFAPP14136 432 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 ITGAXP20702 1163 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 CCND1P24385 295 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 GRNP28799 593 aaKnown RBP6.68□□□□□ -1.34
LIMD1-204ENST00000474665 EEF1DP29692 281 aaKnown RBP6.68□□□□□ -1.34
LIMD1-204ENST00000474665 CMPK1P30085 196 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 ARRB2P32121 409 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 BCL6P41182 706 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 CASP2P42575 452 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 CCT5P48643 541 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 PRKAA2P54646 552 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 CDH13P55290 713 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 ARF3P61204 181 aaPredicted RBP6.68□□□□□ -1.34
LIMD1-204ENST00000474665 ABATP80404 500 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 RELAQ04206 551 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 CDC16Q13042 620 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 TRAF3Q13114 568 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 TUBB3Q13509 450 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 PCLAFQ15004 111 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 THEMIS2Q5TEJ8 643 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 PWWP2BQ6NUJ5 590 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 FOXR1Q6PIV2 292 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 NXPE4Q6UWF7 544 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 ZYG11AQ6WRX3 759 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 HDXQ7Z353 690 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 TIPARPQ7Z3E1 657 aaKnown RBP6.68□□□□□ -1.34
LIMD1-204ENST00000474665 GOLGA7Q7Z5G4 137 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 VN1R5Q7Z5H4 357 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 C17orf64Q86WR6 236 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 PTRH1Q86Y79 214 aaKnown RBP6.68□□□□□ -1.34
LIMD1-204ENST00000474665 MCATQ8IVS2 390 aaKnown RBP6.68□□□□□ -1.34
LIMD1-204ENST00000474665 TMEM151BQ8IW70 566 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 CNPY4Q8N129 248 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 TCAIMQ8N3R3 496 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 ANKRD53Q8N9V6 530 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 ARMC2Q8NEN0 867 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 OR52B6Q8NGF0 335 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 OR6Y1Q8NGX8 325 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 TCP10LQ8TDR4 215 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 ZNF483Q8TF39 744 aaPredicted RBP6.68□□□□□ -1.34
LIMD1-204ENST00000474665 SLC5A11Q8WWX8 675 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 WDR34Q96EX3 536 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 FAM111AQ96PZ2 611 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 TMEM237Q96Q45 408 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 OR6C1Q96RD1 312 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 TAAR9Q96RI9 348 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 MACROD1Q9BQ69 325 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 HAUS8Q9BT25 410 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 SARGQ9BW04 601 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 CENPHQ9H3R5 247 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 VIPAS39Q9H9C1 493 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 AKIRIN1Q9H9L7 192 aaPredicted RBP6.68□□□□□ -1.34
LIMD1-204ENST00000474665 PDE7BQ9NP56 450 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 TNFRSF12AQ9NP84 129 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 TMEM184CQ9NVA4 438 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 DNAJC11Q9NVH1 559 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms