RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 STAG3L1P0CL83 205 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 CEACAM1P13688 526 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 CTNNA1P35221 906 aaKnown RBP3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 CDX1P47902 265 aaPredicted RBP3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 KCNJ1P48048 391 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 LBX1P52954 281 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 HERV-K104P61576 105 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 MEP1BQ16820 701 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 TWISTNBQ3B726 338 aaPredicted RBP3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 PDLIM3Q53GG5 364 aaPredicted RBP3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 PRSS55Q6UWB4 352 aaPredicted RBP3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 MSANTD1Q6ZTZ1 278 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 AMIGO1Q86WK6 493 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 DZIP1Q86YF9 867 aaKnown RBP3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 ZNF440Q8IYI8 595 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 MARVELD2Q8N4S9 558 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 LRTM2Q8N967 370 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 NHLRC2Q8NBF2 726 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 ATAD1Q8NBU5 361 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 UXS1Q8NBZ7 420 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 OR1L3Q8NH93 324 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 FAM222BQ8WU58 562 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 TSACCQ96A04 125 aaPredicted RBP3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 BSCL2Q96G97 398 aaPredicted RBP3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 POM121L2Q96KW2 1035 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 KLHL5Q96PQ7 755 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 OPRPNQ99935 248 aaPredicted RBP3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 DESI2Q9BSY9 194 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 ALDH8A1Q9H2A2 487 aaPredicted RBP3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 MINDY3Q9H8M7 445 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 FGF22Q9HCT0 170 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 C2orf42Q9NWW7 574 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 ITGA11Q9UKX5 1188 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 CHKBQ9Y259 395 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 FANCIQ9NVI1 1328 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 DISP3Q9P2K9 1392 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 UNC13AQ9UPW8 1703 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 UACAQ9BZF9 1416 aa3.1□□□□□ -1.91
TMEM50B-208ENST00000474272 FGD5Q6ZNL6 1462 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 IGHV4-4A0A075B6R2 117 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 A0A1W2PNU3 283 aaPredicted RBP3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 MSGN1A6NI15 193 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 YDJCA8MPS7 323 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 PRSS46E5RG02 174 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 H7C423 109 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 IFIT3O14879 490 aaKnown RBP3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 ARHGEF9O43307 516 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 KHDRBS3O75525 346 aaKnown RBP3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 CDK2AP2O75956 126 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 AP2A2O94973 939 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 RLN1P04808 185 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 ATP1B1P05026 303 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 HSP90AB1P08238 724 aaKnown RBP3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 F3P13726 295 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 CD59P13987 128 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 DPEP1P16444 411 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 DUTP33316 252 aaKnown RBP3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 DNA2P51530 1060 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 SP3Q02447 781 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 CACNG1Q06432 222 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 NFE2L1Q14494 772 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 E2F5Q15329 346 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 RBBP7Q16576 425 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 TYSND1Q2T9J0 566 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 CTR9Q6PD62 1173 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 NHLRC1Q6VVB1 395 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 BTN2A1Q7KYR7 527 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 G2E3Q7L622 706 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 PIWIL3Q7Z3Z3 882 aaKnown RBP3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 CREBRFQ8IUR6 639 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 KLHL7Q8IXQ5 586 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 TMEM178AQ8NBL3 297 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 SLC37A3Q8NCC5 494 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 FIBINQ8TAL6 211 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 SUSD6Q92537 303 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 PIK3R3Q92569 461 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 C10orf90Q96M02 699 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 GDAP1L1Q96MZ0 367 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 IWS1Q96ST2 819 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 PI4K2AQ9BTU6 479 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 CABLES2Q9BTV7 478 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 MTMR12Q9C0I1 747 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 RAVER2Q9HCJ3 691 aaKnown RBP3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 TMEM181Q9P2C4 612 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 EPHA6Q9UF33 1036 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 MAN1B1Q9UKM7 699 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 CDH7Q9ULB5 785 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 PYGO1Q9Y3Y4 419 aa3.09□□□□□ -1.91
TMEM50B-208ENST00000474272 MAPKBP1O60336 1514 aa3.09□□□□□ -1.92
TMEM50B-208ENST00000474272 TIAM1Q13009 1591 aa3.08□□□□□ -1.92
TMEM50B-208ENST00000474272 A0A0U1RQK1 487 aa3.08□□□□□ -1.92
TMEM50B-208ENST00000474272 ZNF320A2RRD8 509 aa3.08□□□□□ -1.92
TMEM50B-208ENST00000474272 MEIOCA2RUB1 952 aa3.08□□□□□ -1.92
TMEM50B-208ENST00000474272 SNURFLB1AK76 121 aa3.08□□□□□ -1.92
TMEM50B-208ENST00000474272 PSMA7O14818 248 aa3.08□□□□□ -1.92
TMEM50B-208ENST00000474272 SEC24AO95486 1093 aa3.08□□□□□ -1.92
TMEM50B-208ENST00000474272 C9P02748 559 aa3.08□□□□□ -1.92
TMEM50B-208ENST00000474272 RAF1P04049 648 aa3.08□□□□□ -1.92
TMEM50B-208ENST00000474272 ANKRD34CP0C6C1 535 aa3.08□□□□□ -1.92
TMEM50B-208ENST00000474272 KCNJ10P78508 379 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms