RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 MMABQ96EY8 250 aaPredicted RBP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 ZNF354BQ96LW1 612 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 CCDC42Q96M95 316 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 ZNF778Q96MU6 729 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 ALS2CR12Q96Q35 445 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 OR2A5Q96R48 311 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 TTC1Q99614 292 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 PLCD4Q9BRC7 762 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 UTP23Q9BRU9 249 aaKnown RBP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 DPH7Q9BTV6 452 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 ACAT2Q9BWD1 397 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 TSSK1BQ9BXA7 367 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 OSBPL8Q9BZF1 889 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 ABHD10Q9NUJ1 306 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 ZNHIT6Q9NWK9 470 aaKnown RBP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 ANKRD10Q9NXR5 420 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 COQ3Q9NZJ6 369 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 SLC2A6Q9UGQ3 507 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 TTC7AQ9ULT0 858 aaPredicted RBP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 EFR3BQ9Y2G0 817 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 R3HDM2Q9Y2K5 976 aaKnown RBP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 FN1P02751 2386 aaKnown RBP4.84□□□□□ -1.64
SNRNP40-204ENST00000474025 CSPG4Q6UVK1 2322 aa4.84□□□□□ -1.64
SNRNP40-204ENST00000474025 CUBNO60494 3623 aa4.84□□□□□ -1.64
SNRNP40-204ENST00000474025 DNAJC13O75165 2243 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 GABRR3A8MPY1 467 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 FOXO6A8MYZ6 492 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 GOLGA6L22H0YM25 854 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 PRRG2O14669 202 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 PRMT5O14744 637 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 MFAP3LO75121 409 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 ZNF189O75820 626 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 EZRP15311 586 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 ZNF24P17028 368 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 KLK2P20151 261 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 CMPK1P30085 196 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 PTGER1P34995 402 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 CTNNA1P35221 906 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 CCNFP41002 786 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 IST1P53990 364 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 RELBQ01201 579 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 TRIM14Q14142 442 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 EXT1Q16394 746 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 MEP1AQ16819 746 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 MINDY4Q4G0A6 757 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 TSTD2Q5T7W7 516 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 ZNF468Q5VIY5 522 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 SLC25A25Q6KCM7 469 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 CAVIN1Q6NZI2 390 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 AADACL2Q6P093 401 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 TTC23LQ6PF05 361 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 SUSD1Q6UWL2 747 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 LDB1Q86U70 411 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 CD163Q86VB7 1156 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 TMEM200AQ86VY9 491 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 ZNF227Q86WZ6 799 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 EID3Q8N140 333 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 CPSF7Q8N684 471 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 DNAAF3Q8N9W5 541 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 FAM98AQ8NCA5 519 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 OR52K1Q8NGK4 314 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 OR4L1Q8NH43 312 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 LILRB4Q8NHJ6 448 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 GSDMBQ8TAX9 411 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 M1APQ8TC57 530 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 SKA2Q8WVK7 121 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 RERGQ96A58 199 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 CYTH2Q99418 400 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 OLFM1Q99784 485 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 FOXC2Q99958 501 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 ZNF559Q9BR84 538 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 KCNK13Q9HB14 408 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 MRPS30Q9NP92 439 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 MMP25Q9NPA2 562 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 DLL4Q9NR61 685 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 SPATA7Q9P0W8 599 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 LRFN1Q9P244 771 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 MARCH4Q9P2E8 410 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 C19orf25Q9UFG5 118 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 KCNN3Q9UGI6 736 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 GNPTGQ9UJJ9 305 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 RIMKLBQ9ULI2 386 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 HRH3Q9Y5N1 445 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 MRFAP1Q9Y605 127 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 HEATR5BQ9P2D3 2071 aa4.83□□□□□ -1.64
SNRNP40-204ENST00000474025 HCFC1P51610 2035 aa4.82□□□□□ -1.64
SNRNP40-204ENST00000474025 NKX2-6A6NCS4 301 aa4.82□□□□□ -1.64
SNRNP40-204ENST00000474025 OR2W5A6NFC9 320 aa4.82□□□□□ -1.64
SNRNP40-204ENST00000474025 FAM90A27PA6NNH2 459 aa4.82□□□□□ -1.64
SNRNP40-204ENST00000474025 ARHGEF33A8MVX0 844 aa4.82□□□□□ -1.64
SNRNP40-204ENST00000474025 H0YIG0 161 aa4.82□□□□□ -1.64
SNRNP40-204ENST00000474025 MYO1CO00159 1063 aa4.82□□□□□ -1.64
SNRNP40-204ENST00000474025 TXNDC9O14530 226 aa4.82□□□□□ -1.64
SNRNP40-204ENST00000474025 HAT1O14929 419 aa4.82□□□□□ -1.64
SNRNP40-204ENST00000474025 NME2P1O60361 137 aa4.82□□□□□ -1.64
SNRNP40-204ENST00000474025 SLC25A12O75746 678 aa4.82□□□□□ -1.64
SNRNP40-204ENST00000474025 TOXO94900 526 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms