RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 ALS2CR12Q96Q35 445 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 TMUB1Q9BVT8 246 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 GSX1Q9H4S2 264 aaPredicted RBP9.05□□□□□ -0.96
MCF2L-223ENST00000473345 ABCF3Q9NUQ8 709 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 PCDHGB6Q9Y5F9 930 aa9.05□□□□□ -0.96
MCF2L-223ENST00000473345 TCRBV7S3A2A0A539 114 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 ZNF860A6NHJ4 632 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 H7BY64 318 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 TTI1O43156 1089 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 LIASO43766 372 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 LCMT2O60294 686 aaKnown RBP9.04□□□□□ -0.96
MCF2L-223ENST00000473345 RDH16O75452 317 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 TOXO94900 526 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 SP1P08047 785 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 CAPN3P20807 821 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 RPL22P35268 128 aaKnown RBP9.04□□□□□ -0.96
MCF2L-223ENST00000473345 XCR1P46094 333 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 SMSP52788 366 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 PNLIPRP1P54315 467 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 SESN2P58004 480 aaPredicted RBP9.04□□□□□ -0.96
MCF2L-223ENST00000473345 RBPJQ06330 500 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 CUL1Q13616 776 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 FAM53BQ14153 422 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 SIX1Q15475 284 aaPredicted RBP9.04□□□□□ -0.96
MCF2L-223ENST00000473345 SFT2D3Q587I9 215 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 GARNL3Q5VVW2 1013 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 TMEM214Q6NUQ4 689 aaKnown RBP9.04□□□□□ -0.96
MCF2L-223ENST00000473345 ZNF549Q6P9A3 640 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 PPP1R21Q6ZMI0 780 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 CYHR1Q6ZMK1 362 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 CENPUQ71F23 418 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 OTOAQ7RTW8 1153 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 LINC00523Q86TU6 105 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 REXO1L1PQ8IX06 675 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 MPP5Q8N3R9 675 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 PHF10Q8WUB8 498 aaKnown RBP9.04□□□□□ -0.96
MCF2L-223ENST00000473345 C1orf54Q8WWF1 131 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 SMPDL3AQ92484 453 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 CALR3Q96L12 384 aaKnown RBP9.04□□□□□ -0.96
MCF2L-223ENST00000473345 PRAP1Q96NZ9 151 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 FERMT1Q9BQL6 677 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 CDCP1Q9H5V8 836 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 KCNK13Q9HB14 408 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 MMP25Q9NPA2 562 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 RAB6BQ9NRW1 208 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 SYBUQ9NX95 663 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 CDC14AQ9UNH5 594 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 CRYL1Q9Y2S2 319 aa9.04□□□□□ -0.96
MCF2L-223ENST00000473345 A0A1B0GTH9 108 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 FEZF1A0PJY2 475 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 PINLYPA6NC86 204 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 E9PLN8 166 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 SMAPO00193 183 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 PSMD3O43242 534 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 NME2P1O60361 137 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 ABCB7O75027 752 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 NSA2O95478 260 aaKnown RBP9.03□□□□□ -0.96
MCF2L-223ENST00000473345 IFNB1P01574 187 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 UQCRHP07919 91 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 ANXA5P08758 320 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 EZRP15311 586 aaKnown RBP9.03□□□□□ -0.96
MCF2L-223ENST00000473345 NME2P22392 152 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 TPP2P29144 1249 aaPredicted RBP9.03□□□□□ -0.96
MCF2L-223ENST00000473345 IMPA1P29218 277 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 EEF1DP29692 281 aaKnown RBP9.03□□□□□ -0.96
MCF2L-223ENST00000473345 DNAJA1P31689 397 aaKnown RBP9.03□□□□□ -0.96
MCF2L-223ENST00000473345 RPA3P35244 121 aaPredicted RBP9.03□□□□□ -0.96
MCF2L-223ENST00000473345 CYLC1P35663 651 aaPredicted RBP9.03□□□□□ -0.96
MCF2L-223ENST00000473345 BCL6P41182 706 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 CLCN7P51798 805 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 ART1P52961 327 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 IST1P53990 364 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 SLC26A5P58743 744 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 OLR1P78380 273 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 SNX1Q13596 522 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 USP10Q14694 798 aaKnown RBP9.03□□□□□ -0.96
MCF2L-223ENST00000473345 TMED2Q15363 201 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 TYSND1Q2T9J0 566 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 MINDY4Q4G0A6 757 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 KRTCAP3Q53RY4 240 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 CMPK2Q5EBM0 449 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 MFSD4BQ5TF39 518 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 SLC25A25Q6KCM7 469 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 PAPD4Q6PIY7 484 aaKnown RBP9.03□□□□□ -0.96
MCF2L-223ENST00000473345 MBOAT1Q6ZNC8 495 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 CEP128Q6ZU80 1094 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 CD163Q86VB7 1156 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 CCDC71Q8IV32 467 aaPredicted RBP9.03□□□□□ -0.96
MCF2L-223ENST00000473345 SUN3Q8TAQ9 357 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 ZCCHC10Q8TBK6 192 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 ELP5Q8TE02 316 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 LRRC45Q96CN5 670 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 TM4SF19Q96DZ7 209 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 ZNF354BQ96LW1 612 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 VKORC1Q9BQB6 163 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 UTP23Q9BRU9 249 aaKnown RBP9.03□□□□□ -0.96
MCF2L-223ENST00000473345 GNPTGQ9UJJ9 305 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 PPT2Q9UMR5 302 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 PPP2R2CQ9Y2T4 447 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 SCN2AQ99250 2005 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms