RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ITGA2P17301 1181 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 BMP7P18075 431 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 MAOAP21397 527 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 PIK3R1P27986 724 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 PKLRP30613 574 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 HNRNPH1P31943 449 aaKnown RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 TFF2Q03403 129 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 CETN1Q12798 172 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 TSTA3Q13630 321 aaPredicted RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 PTGISQ16647 500 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 GCNT6Q5T4J0 391 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 PRAMEF17Q5VTA0 474 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 ZNF841Q6ZN19 808 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 RBM43Q6ZSC3 357 aaKnown RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 CIR1Q86X95 450 aaPredicted RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 RBFAQ8N0V3 343 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 SCCPDHQ8NBX0 429 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 NOC3LQ8WTT2 800 aaKnown RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 MAP4K1Q92918 833 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 ZNF707Q96C28 371 aaPredicted RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 THOC1Q96FV9 657 aaKnown RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 VCPIP1Q96JH7 1222 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 KCNK16Q96T55 309 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 TCHPQ9BT92 498 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 NSD3Q9BZ95 1437 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 B3GNT4Q9C0J1 378 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 CXXC4Q9H2H0 198 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 ECT2Q9H8V3 914 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 KIAA1551Q9HCM1 1747 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 ANKRD10Q9NXR5 420 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 SLCO1C1Q9NYB5 712 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 FLRT1Q9NZU1 646 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 ACSL5Q9ULC5 683 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 ANKRD50Q9ULJ7 1429 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 BTAF1O14981 1849 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 CPDO75976 1380 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 METP08581 1390 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 RBBP6Q7Z6E9 1792 aaKnown RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 A0A096LPK6 155 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 CLRN2A0PK11 232 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 MFSD2BA6NFX1 497 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 TARM1B6A8C7 271 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 DNALI1O14645 258 aaPredicted RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 KLF11O14901 512 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 GRID2O43424 1007 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 MED7O43513 233 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 ZNF821O75541 412 aaPredicted RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 PGK2P07205 417 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 HOXB5P09067 269 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 MYOD1P15172 320 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 NCK1P16333 377 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 TCEA1P23193 301 aaKnown RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 AVPR1AP37288 418 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 MXI1P50539 228 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 CCL11P51671 97 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 ZNF75DP51815 510 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 AIF1P55008 147 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 CLDN15P56746 228 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 HOXA4Q00056 320 aaPredicted RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 SNX1Q13596 522 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 TRADDQ15628 312 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 IMMTQ16891 758 aaKnown RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 DCAF6Q58WW2 860 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 RABGAP1LQ5R372 815 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 VWA5B1Q5TIE3 1220 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 VSTM1Q6UX27 236 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 Q6YL49 198 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 SHFQ7M4L6 423 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 MCEMP1Q8IX19 187 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 PM20D2Q8IYS1 436 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 SLC5A8Q8N695 610 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 EIF1ADQ8N9N8 165 aaKnown RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 NPEPL1Q8NDH3 523 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 KBTBD8Q8NFY9 601 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 BBS10Q8TAM1 723 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 OSR1Q8TAX0 266 aaPredicted RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 FAM110BQ8TC76 370 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 BRSK1Q8TDC3 778 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 SMPDL3BQ92485 455 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 KAT2BQ92831 832 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 ABHD8Q96I13 439 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 FAM71F1Q96KD3 344 aaPredicted RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 MMTAG2Q9BU76 263 aaKnown RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 TRAF4Q9BUZ4 470 aaPredicted RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 GCOM2Q9BZD3 368 aaPredicted RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 DCLRE1BQ9H816 532 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 Q9H8V8 135 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 TM9SF3Q9HD45 589 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 THSD1Q9NS62 852 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 FOXJ2Q9P0K8 574 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 RUVBL2Q9Y230 463 aaKnown RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 ZNF510Q9Y2H8 683 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 ABCC11Q96J66 1382 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 DOCK7Q96N67 2140 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 A0A0G2JLL6 359 aaPredicted RBP2.5□□□□□ -2.01
XRN1-210ENST00000472697 KANSL1LA0AUZ9 987 aa2.5□□□□□ -2.01
XRN1-210ENST00000472697 GAGE12BA1L429 117 aa2.5□□□□□ -2.01
XRN1-210ENST00000472697 GAGE12HA6NDE8 117 aa2.5□□□□□ -2.01
XRN1-210ENST00000472697 NEMP2A6NFY4 417 aa2.5□□□□□ -2.01
XRN1-210ENST00000472697 SGK1O00141 431 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms