RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 H0YIG0 161 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 SLC16A5O15375 505 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 WFS1O76024 890 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 BMP10O95393 424 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 NSA2O95478 260 aaKnown RBP21.35■■□□□ 1.01
C9orf3-213ENST00000471978 AHSGP02765 367 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 UQCRHP07919 91 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 CELA2AP08217 269 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 CSNK1G2P78368 415 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 NAE1Q13564 534 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 BBS9Q3SYG4 887 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 RIPOR1Q6ZS17 1223 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 KIAA0408Q6ZU52 694 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 C17orf64Q86WR6 236 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 IGDCC3Q8IVU1 814 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 CNTN4Q8IWV2 1026 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 LINGO1Q96FE5 620 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 PPANQ9NQ55 473 aaKnown RBP21.35■■□□□ 1.01
C9orf3-213ENST00000471978 TRMT1Q9NXH9 659 aaKnown RBP21.35■■□□□ 1.01
C9orf3-213ENST00000471978 POLEQ07864 2286 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 FEZF1A0PJY2 475 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 E2F3O00716 465 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 HIST1H2AGP0C0S8 130 aaPredicted RBP21.34■■□□□ 1.01
C9orf3-213ENST00000471978 C8orf89P0DMQ9 161 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 EDN3P14138 238 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 HIST1H2ADP20671 130 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 CCND1P24385 295 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 EFNA3P52797 238 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 PCOLCEQ15113 449 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 PHKG1Q16816 387 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 TMEM214Q6NUQ4 689 aaKnown RBP21.34■■□□□ 1.01
C9orf3-213ENST00000471978 RPUSD3Q6P087 351 aaKnown RBP21.34■■□□□ 1.01
C9orf3-213ENST00000471978 FAM180AQ6UWF9 173 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 PRSS41Q7RTY9 318 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 CAMKVQ8NCB2 501 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 METTL21AQ8WXB1 218 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 SLCO2A1Q92959 643 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 CERS2Q96G23 380 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 HIST1H2AHQ96KK5 128 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 HIST1H2AJQ99878 128 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 H2AFJQ9BTM1 129 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 SLC17A6Q9P2U8 582 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 CELSR2Q9HCU4 2923 aa21.34■■□□□ 1.01
C9orf3-213ENST00000471978 JRKO75564 520 aa21.33■■□□□ 1.01
C9orf3-213ENST00000471978 ITGAMP11215 1152 aa21.33■■□□□ 1.01
C9orf3-213ENST00000471978 ICAM2P13598 275 aa21.33■■□□□ 1.01
C9orf3-213ENST00000471978 BCL6P41182 706 aa21.33■■□□□ 1.01
C9orf3-213ENST00000471978 AP2B1P63010 937 aa21.33■■□□□ 1.01
C9orf3-213ENST00000471978 MINDY4Q4G0A6 757 aa21.33■■□□□ 1.01
C9orf3-213ENST00000471978 MFSD4BQ5TF39 518 aa21.33■■□□□ 1.01
C9orf3-213ENST00000471978 LCTLQ6UWM7 567 aa21.33■■□□□ 1.01
C9orf3-213ENST00000471978 MAMDC2Q7Z304 686 aaPredicted RBP21.33■■□□□ 1.01
C9orf3-213ENST00000471978 GALNT7Q86SF2 657 aa21.33■■□□□ 1.01
C9orf3-213ENST00000471978 OR51Q1Q8NH59 317 aa21.33■■□□□ 1.01
C9orf3-213ENST00000471978 HAS2Q92819 552 aa21.33■■□□□ 1.01
C9orf3-213ENST00000471978 TM4SF19Q96DZ7 209 aa21.33■■□□□ 1.01
C9orf3-213ENST00000471978 MAGEB10Q96LZ2 347 aaPredicted RBP21.33■■□□□ 1.01
C9orf3-213ENST00000471978 TUBB6Q9BUF5 446 aa21.33■■□□□ 1.01
C9orf3-213ENST00000471978 SGPP1Q9BX95 441 aa21.33■■□□□ 1.01
C9orf3-213ENST00000471978 VN1R1Q9GZP7 353 aa21.33■■□□□ 1.01
C9orf3-213ENST00000471978 HCN3Q9P1Z3 774 aa21.33■■□□□ 1.01
C9orf3-213ENST00000471978 ITPR2Q14571 2701 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 PABPN1LA6NDY0 278 aaKnown RBP21.32■■□□□ 1
C9orf3-213ENST00000471978 SGK494L7N484 410 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 LCMT2O60294 686 aaKnown RBP21.32■■□□□ 1
C9orf3-213ENST00000471978 CLDN1O95832 211 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 CDH1P12830 882 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 NPPBP16860 134 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 TCP1P17987 556 aaKnown RBP21.32■■□□□ 1
C9orf3-213ENST00000471978 IL1RNP18510 177 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 IVDP26440 423 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 GRK3P35626 688 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 TNFSF10P50591 281 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 IL2P60568 153 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 PDAP1Q13442 181 aaKnown RBP21.32■■□□□ 1
C9orf3-213ENST00000471978 HP1BP3Q5SSJ5 553 aaPredicted RBP21.32■■□□□ 1
C9orf3-213ENST00000471978 TEDDM1Q5T9Z0 273 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 CAPN13Q6MZZ7 669 aaPredicted RBP21.32■■□□□ 1
C9orf3-213ENST00000471978 ASPGQ86U10 573 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 SLC26A11Q86WA9 606 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 SHISA5Q8N114 240 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 PDIK1LQ8N165 341 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 AMER2Q8N7J2 671 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 BCORP1Q8N888 145 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 GPATCH11Q8N954 259 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 ZCCHC10Q8TBK6 192 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 SLC13A3Q8WWT9 602 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 CFAP36Q96G28 342 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 IMMP1LQ96LU5 166 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 CYTH2Q99418 400 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 ANKHQ9HCJ1 492 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 OSGIN2Q9Y236 505 aa21.32■■□□□ 1
C9orf3-213ENST00000471978 TRAV17A0A0B4J275 112 aa21.31■■□□□ 1
C9orf3-213ENST00000471978 TSPAN12O95859 305 aa21.31■■□□□ 1
C9orf3-213ENST00000471978 F10P00742 488 aa21.31■■□□□ 1
C9orf3-213ENST00000471978 ELK3P41970 407 aa21.31■■□□□ 1
C9orf3-213ENST00000471978 XCR1P46094 333 aa21.31■■□□□ 1
C9orf3-213ENST00000471978 HECTD2Q5U5R9 776 aa21.31■■□□□ 1
C9orf3-213ENST00000471978 KCT2Q8NC54 265 aa21.31■■□□□ 1
C9orf3-213ENST00000471978 PWWP2AQ96N64 755 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms