RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 ANKRD34AQ69YU3 496 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 FRMPD2BQ6IN97 320 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 USP43Q70EL4 1123 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 GRAMD1CQ8IYS0 662 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 NPWQ8N729 165 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 IQUBQ8NA54 791 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 C10orf105Q8TEF2 133 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 NTAN1Q96AB6 310 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 PLPPR2Q96GM1 343 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 GSDMAQ96QA5 445 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 TMEM204Q9BSN7 226 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 CCM2Q9BSQ5 444 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 RAB11FIP5Q9BXF6 653 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 TDRD1Q9BXT4 1180 aaKnown RBP6.04□□□□□ -1.44
HDAC3-206ENST00000471968 SCAND2PQ9GZW5 306 aaPredicted RBP6.04□□□□□ -1.44
HDAC3-206ENST00000471968 SLITRK2Q9H156 845 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 SLC6A15Q9H2J7 730 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 PIGMQ9H3S5 423 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 ALG2Q9H553 416 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 MVB12BQ9H7P6 319 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 ENAMQ9NRM1 1142 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 METTL5Q9NRN9 209 aaKnown RBP6.04□□□□□ -1.44
HDAC3-206ENST00000471968 PCDHGC3Q9UN70 934 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 SHOC2Q9UQ13 582 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 LOC105369274A0A096LPK9 316 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 C15orf38-AP3S2A0A0A6YYH1 394 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 LOC102723532A0A0G2JNH3 316 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 SLC5A10A0PJK1 596 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 FEZF1A0PJY2 475 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 CD8B2A6NJW9 211 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 POM121CA8CG34 1229 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 G3V4G9 280 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 M0QZ24 198 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 IFRD1O00458 451 aaPredicted RBP6.03□□□□□ -1.44
HDAC3-206ENST00000471968 PES1O00541 588 aaKnown RBP6.03□□□□□ -1.44
HDAC3-206ENST00000471968 GPR39O43194 453 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 CCP110O43303 1012 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 SRPX2O60687 465 aaPredicted RBP6.03□□□□□ -1.44
HDAC3-206ENST00000471968 CTSVO60911 334 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 SNRNP200O75643 2136 aaKnown RBP6.03□□□□□ -1.44
HDAC3-206ENST00000471968 ESR1P03372 595 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 ERVK-10P10266 1014 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 NFKB1P19838 968 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 PTPN6P29350 595 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 GCH1P30793 250 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 CD79BP40259 229 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 MMP13P45452 471 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 TRPC1P48995 793 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 SRSF4Q08170 494 aaKnown RBP6.03□□□□□ -1.44
HDAC3-206ENST00000471968 SCGB2A2Q13296 93 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 PDK1Q15118 436 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 QPCTQ16769 361 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 RUSC1-AS1Q66K80 236 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 SCYL2Q6P3W7 929 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 DEF8Q6ZN54 512 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 GPSM1Q86YR5 675 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 OR4N4Q8N0Y3 316 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 LILRB1Q8NHL6 650 aaPredicted RBP6.03□□□□□ -1.44
HDAC3-206ENST00000471968 FAM172AQ8WUF8 416 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 INTS12Q96CB8 462 aaKnown RBP6.03□□□□□ -1.44
HDAC3-206ENST00000471968 SOX7Q9BT81 388 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 NTMT1Q9BV86 223 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 PCDH9Q9HC56 1237 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 NT5MQ9NPB1 228 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 RAD18Q9NS91 495 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.03□□□□□ -1.44
HDAC3-206ENST00000471968 HCN3Q9P1Z3 774 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 NFKBIL1Q9UBC1 381 aaPredicted RBP6.03□□□□□ -1.44
HDAC3-206ENST00000471968 PACSIN3Q9UKS6 424 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 PLAGL1Q9UM63 463 aa6.03□□□□□ -1.44
HDAC3-206ENST00000471968 KIAA1109Q2LD37 5005 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 A0A0A6YYC8 382 aaPredicted RBP6.02□□□□□ -1.45
HDAC3-206ENST00000471968 A0A0J9YVX5 310 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 LRRC14BA6NHZ5 514 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 I3L1I5 382 aaPredicted RBP6.02□□□□□ -1.45
HDAC3-206ENST00000471968 UGT1A9O60656 530 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 B4GALT2O60909 372 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 SMNDC1O75940 238 aaKnown RBP eCLIP6.02□□□□□ -1.45
HDAC3-206ENST00000471968 FTCDO95954 541 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 THBDP07204 575 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 NUDT17P0C025 328 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 PIRTP0C851 137 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 DNASE1L1P49184 302 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 FMO5P49326 533 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 BOP1Q14137 746 aaKnown RBP6.02□□□□□ -1.45
HDAC3-206ENST00000471968 KIR2DS3Q14952 304 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 LONRF2Q1L5Z9 754 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 LDLRAP1Q5SW96 308 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 RNF187Q5TA31 235 aaPredicted RBP6.02□□□□□ -1.45
HDAC3-206ENST00000471968 MARC1Q5VT66 337 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 THSD4Q6ZMP0 1018 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 CCDC116Q8IYX3 515 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 GCNT2Q8N0V5 402 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 SVOPLQ8N434 492 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 OR5AR1Q8NGP9 310 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 LMO3Q8TAP4 145 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 NEIL3Q8TAT5 605 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 RAB3IL1Q8TBN0 382 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 SLC44A1Q8WWI5 657 aa6.02□□□□□ -1.45
HDAC3-206ENST00000471968 NEUROG1Q92886 237 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms