RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 PPP1R16AQ96I34 528 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 MTERF1Q99551 399 aaKnown RBP16.78■□□□□ 0.28
RRP1-202ENST00000471909 FUNDC2Q9BWH2 189 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 HMG20AQ9NP66 347 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 GIN1Q9NXP7 522 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 GDE1Q9NZC3 331 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 HTR3EA5X5Y0 456 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 UPK1AO00322 258 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 LZTS3O60299 673 aaPredicted RBP16.78■□□□□ 0.28
RRP1-202ENST00000471909 LRATO95237 230 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 MAPK1P28482 360 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 HOXD12P35452 270 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 PBX2P40425 430 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 OPRD1P41143 372 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 IL12RB1P42701 662 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 OXA1LQ15070 435 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 PDGFRLQ15198 375 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 VITQ6UXI7 678 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 ZNF548Q8NEK5 533 aaPredicted RBP16.78■□□□□ 0.28
RRP1-202ENST00000471909 TESCQ96BS2 214 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 SDCCAG3Q96C92 435 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 SH3YL1Q96HL8 342 aaPredicted RBP16.78■□□□□ 0.28
RRP1-202ENST00000471909 FOPNLQ96NB1 174 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 CCDC115Q96NT0 180 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 ALPK1Q96QP1 1244 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 EBPLQ9BY08 206 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 DGCR6LQ9BY27 220 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 MROQ9BYG7 248 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 TRPV4Q9HBA0 871 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 THG1LQ9NWX6 298 aaKnown RBP16.78■□□□□ 0.28
RRP1-202ENST00000471909 HCN2Q9UL51 889 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 PCDHB14Q9Y5E9 798 aa16.78■□□□□ 0.28
RRP1-202ENST00000471909 UNC80Q8N2C7 3258 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 BCAS1O75363 584 aaPredicted RBP16.77■□□□□ 0.28
RRP1-202ENST00000471909 C1orf105O95561 183 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 ACPPP15309 386 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 S100A3P33764 101 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 DPTQ07507 201 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 FAM98BQ52LJ0 330 aaKnown RBP16.77■□□□□ 0.28
RRP1-202ENST00000471909 CCDC92Q53HC0 331 aaPredicted RBP16.77■□□□□ 0.28
RRP1-202ENST00000471909 TTC23Q5W5X9 447 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 ERN2Q76MJ5 926 aaKnown RBP16.77■□□□□ 0.28
RRP1-202ENST00000471909 ANKRD46Q86W74 232 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 ZNF547Q8IVP9 402 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 HHIPQ96QV1 700 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 ZCCHC2Q9C0B9 1178 aaKnown RBP16.77■□□□□ 0.28
RRP1-202ENST00000471909 TOR3AQ9H497 397 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 MAGED1Q9Y5V3 778 aaPredicted RBP16.77■□□□□ 0.28
RRP1-202ENST00000471909 CNOT3O75175 753 aaKnown RBP16.77■□□□□ 0.28
RRP1-202ENST00000471909 PRSS23O95084 383 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 HPRP00739 348 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 ANXA6P08133 673 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 RAP2AP10114 183 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 PCNAP12004 261 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 MAPK9P45984 424 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 RAD23AP54725 363 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 CSTF3Q12996 717 aaKnown RBP16.77■□□□□ 0.28
RRP1-202ENST00000471909 AQP6Q13520 282 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 PGS1Q32NB8 556 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 TMEM52BQ4KMG9 183 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 LRIF1Q5T3J3 769 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 ADNP2Q6IQ32 1131 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 GRHL2Q6ISB3 625 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 PHACTR4Q8IZ21 702 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 FAM9CQ8IZT9 166 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 PARP8Q8N3A8 854 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 SUSD6Q92537 303 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 AURKBQ96GD4 344 aaPredicted RBP16.77■□□□□ 0.28
RRP1-202ENST00000471909 FCRL1Q96LA6 429 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 INPP5KQ9BT40 448 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 KCNH6Q9H252 994 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 TRIM39Q9HCM9 518 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 DYRK4Q9NR20 520 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 SPATA6Q9NWH7 488 aaPredicted RBP16.77■□□□□ 0.28
RRP1-202ENST00000471909 OBP2AQ9NY56 170 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 VPS29Q9UBQ0 182 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 BAG5Q9UL15 447 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 MAN2B2Q9Y2E5 1009 aa16.77■□□□□ 0.28
RRP1-202ENST00000471909 H0YIV9 168 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 ERN1O75460 977 aaKnown RBP16.76■□□□□ 0.27
RRP1-202ENST00000471909 NR4A1P22736 598 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 PTPN6P29350 595 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 P2RY2P41231 377 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 MTHFRP42898 656 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 CHRNB3Q05901 458 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 ZNF33BQ06732 778 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 PCDH1Q08174 1060 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 DDX39BQ13838 428 aaKnown RBP16.76■□□□□ 0.27
RRP1-202ENST00000471909 BTLAQ7Z6A9 289 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 ZDHHC13Q8IUH4 622 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 ZNF480Q8WV37 535 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 FIG4Q92562 907 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 FKBP10Q96AY3 582 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 RDH12Q96NR8 316 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 SH3GL1Q99961 368 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 WDR12Q9GZL7 423 aaKnown RBP16.76■□□□□ 0.27
RRP1-202ENST00000471909 GORASP2Q9H8Y8 452 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 PRSS16Q9NQE7 514 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 PCDHGA8Q9Y5G5 932 aa16.76■□□□□ 0.27
RRP1-202ENST00000471909 SNX5Q9Y5X3 404 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms