RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 KRT5P13647 590 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 NCF1P14598 390 aaPredicted RBP6.11□□□□□ -1.43
SMC5-202ENST00000471372 GLIPR1P48060 266 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 PITPNBP48739 271 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 FUT6P51993 359 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 FASTKD1Q53R41 847 aaKnown RBP6.11□□□□□ -1.43
SMC5-202ENST00000471372 XKR3Q5GH77 459 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 DCAF10Q5QP82 559 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 RAET1GQ6H3X3 334 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 ZNF554Q86TJ5 538 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 PHLDA1Q8WV24 401 aaPredicted RBP6.11□□□□□ -1.43
SMC5-202ENST00000471372 HSD17B8Q92506 261 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 RBM41Q96IZ5 413 aaKnown RBP6.11□□□□□ -1.43
SMC5-202ENST00000471372 CTAGE1Q96RT6 745 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 POLR3CQ9BUI4 534 aaPredicted RBP6.11□□□□□ -1.43
SMC5-202ENST00000471372 CCSER1Q9C0I3 900 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 WWTR1Q9GZV5 400 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 C10orf88Q9H8K7 445 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 TCF7L2Q9NQB0 619 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 ELOVL5Q9NYP7 299 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 SLC7A7Q9UM01 511 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 NSG2Q9Y328 171 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 KIAA1217Q5T5P2 1943 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 CGNL1Q0VF96 1302 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 ANTXRLA6NF34 631 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 HNRNPCL2B2RXH8 293 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 GMNNO75496 209 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 STBD1O95210 358 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 GAS8O95995 478 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 TOMM40O96008 361 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 FUT1P19526 365 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 EPHA2P29317 976 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 CDH11P55287 796 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 TRAP1Q12931 704 aaKnown RBP6.1□□□□□ -1.43
SMC5-202ENST00000471372 TRAF2Q12933 501 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 ZBTB17Q13105 803 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 DPYSQ14117 519 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 ZNF260Q3ZCT1 412 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 ZC2HC1CQ53FD0 456 aaPredicted RBP6.1□□□□□ -1.43
SMC5-202ENST00000471372 SYVN1Q86TM6 617 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 MUC20Q8N307 709 aaPredicted RBP6.1□□□□□ -1.43
SMC5-202ENST00000471372 LRTM2Q8N967 370 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 OR2T12Q8NG77 320 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 HAS2Q92819 552 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 LGALS12Q96DT0 336 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 ZNF385AQ96PM9 386 aaKnown RBP6.1□□□□□ -1.43
SMC5-202ENST00000471372 LAT2Q9GZY6 243 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 RAB17Q9H0T7 212 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 C5orf66Q9H5L9 145 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 GAREM1Q9H706 876 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 COQ10BQ9H8M1 238 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 PSORS1C1Q9UIG5 152 aa6.1□□□□□ -1.43
SMC5-202ENST00000471372 UBE4BO95155 1302 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 TRIM64CA6NLI5 447 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 C2orf81A6NN90 581 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 MPHOSPH10O00566 681 aaKnown RBP6.09□□□□□ -1.43
SMC5-202ENST00000471372 PPEF2O14830 753 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 SLC22A2O15244 555 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 TEX28O15482 410 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 SSX5O60225 188 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 APOHP02749 345 aaPredicted RBP6.09□□□□□ -1.43
SMC5-202ENST00000471372 CD59P13987 128 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 B4GALT1P15291 398 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 CA4P22748 312 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 DNAJB1P25685 340 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 CCND2P30279 289 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 SRD5A2P31213 254 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 HSPA1LP34931 641 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 SFTPDP35247 375 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 MAGEA4P43358 317 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 FMO5P49326 533 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 NR0B1P51843 470 aaKnown RBP6.09□□□□□ -1.43
SMC5-202ENST00000471372 TRA2BP62995 288 aaKnown RBP6.09□□□□□ -1.43
SMC5-202ENST00000471372 SLC3A1Q07837 685 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 SPP2Q13103 211 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 SF3B4Q15427 424 aaKnown RBP eCLIP6.09□□□□□ -1.434e-8■□□□□ 10.1
SMC5-202ENST00000471372 ZNF542PQ5EBM4 170 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 IRGCQ6NXR0 463 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 SFR1Q86XK3 245 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 SRRM1Q8IYB3 904 aaKnown RBP6.09□□□□□ -1.43
SMC5-202ENST00000471372 DNAJC22Q8N4W6 341 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 MAPKAPK5-AS1Q8N8E1 139 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 PANK2Q9BZ23 570 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 ZDHHC6Q9H6R6 413 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 RAVER2Q9HCJ3 691 aaKnown RBP6.09□□□□□ -1.43
SMC5-202ENST00000471372 FAM207AQ9NSI2 230 aaPredicted RBP6.09□□□□□ -1.43
SMC5-202ENST00000471372 ANKMY1Q9P2S6 941 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 MALT1Q9UDY8 824 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 XPO7Q9UIA9 1087 aaKnown RBP6.09□□□□□ -1.43
SMC5-202ENST00000471372 RIPK3Q9Y572 518 aa6.09□□□□□ -1.43
SMC5-202ENST00000471372 CLEC18AA5D8T8 446 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 CTSVO60911 334 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 ZNF18P17022 549 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 LGALS3BPQ08380 585 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 CDH18Q13634 790 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 HERC3Q15034 1050 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 KRT31Q15323 416 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 TRADDQ15628 312 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 GPR33Q49SQ1 333 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 IRAK1BP1Q5VVH5 260 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms