RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 IGHV1OR21-1A0A087WYE8 117 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 A0A088AWK7 358 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 LNP1A1A4G5 178 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 TLCD2A6NGC4 264 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 MAGEB17A8MXT2 336 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 HAT1O14929 419 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 LSM1O15116 133 aaKnown RBP9.36□□□□□ -0.91
CCM2-204ENST00000470837 SLC22A2O15244 555 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 TNFSF14O43557 240 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 PRAMEF4O60810 478 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 CLEC3AO75596 197 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 LDOC1O95751 146 aaPredicted RBP9.36□□□□□ -0.91
CCM2-204ENST00000470837 TGFB1P01137 390 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 SLC35G6P0C7Q6 338 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 ZNF10P21506 573 aaPredicted RBP9.36□□□□□ -0.91
CCM2-204ENST00000470837 ADSLP30566 484 aaPredicted RBP9.36□□□□□ -0.91
CCM2-204ENST00000470837 MLLT3P42568 568 aaPredicted RBP9.36□□□□□ -0.91
CCM2-204ENST00000470837 SCTRP47872 440 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 STXBP1P61764 594 aaKnown RBP9.36□□□□□ -0.91
CCM2-204ENST00000470837 RPS13P62277 151 aaKnown RBP9.36□□□□□ -0.91
CCM2-204ENST00000470837 CYP4F2P78329 520 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 EMX2Q04743 252 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 CYP4F3Q08477 520 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 MAPRE2Q15555 327 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 TMEM35AQ53FP2 167 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 C6orf136Q5SQH8 315 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 TMTC4Q5T4D3 741 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 PRAMEF9Q5VWM5 478 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 OGFOD2Q6N063 350 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 FAM92BQ6ZTR7 304 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 LARP4Q71RC2 724 aaKnown RBP eCLIP9.36□□□□□ -0.91
CCM2-204ENST00000470837 KANSL1Q7Z3B3 1105 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 ZFAND4Q86XD8 727 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 FAM20CQ8IXL6 584 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.36□□□□□ -0.91
CCM2-204ENST00000470837 CARFQ8N187 725 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 MIER2Q8N344 545 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 C19orf47Q8N9M1 422 aaKnown RBP9.36□□□□□ -0.91
CCM2-204ENST00000470837 MFSD9Q8NBP5 474 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 ZNF740Q8NDX6 193 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 SRFBP1Q8NEF9 429 aaKnown RBP9.36□□□□□ -0.91
CCM2-204ENST00000470837 RHBDD1Q8TEB9 315 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 SLC13A3Q8WWT9 602 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 CMTM5Q96DZ9 223 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 TCTN2Q96GX1 697 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 CNDP2Q96KP4 475 aaKnown RBP9.36□□□□□ -0.91
CCM2-204ENST00000470837 ZBTB18Q99592 522 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 ZFYVE21Q9BQ24 234 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 EDEM2Q9BV94 578 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 NMUR2Q9GZQ4 415 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 RAB33BQ9H082 229 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 KLHL25Q9H0H3 589 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 ABCG4Q9H172 646 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 RHBGQ9H310 441 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 TMEM9BQ9NQ34 198 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 DMRT3Q9NQL9 472 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 DNAAF2Q9NVR5 837 aaKnown RBP9.36□□□□□ -0.91
CCM2-204ENST00000470837 IRAK4Q9NWZ3 460 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 FTSJ1Q9UET6 329 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 EPHA6Q9UF33 1036 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 KLHL3Q9UH77 587 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 KLHL20Q9Y2M5 609 aa9.36□□□□□ -0.91
CCM2-204ENST00000470837 SDK1Q7Z5N4 2213 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 IGKV1-8A0A0C4DH67 115 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 A0A0J9YVX5 310 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 GNG14A0A1W2PPG7 69 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 OR2A25A4D2G3 310 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 EME2A4GXA9 379 aaPredicted RBP9.35□□□□□ -0.91
CCM2-204ENST00000470837 ERICH4A6NGS2 130 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 PSMD12O00232 456 aaPredicted RBP9.35□□□□□ -0.91
CCM2-204ENST00000470837 TXNDC9O14530 226 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 NDUFS4O43181 175 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 SH3BGRLO75368 114 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 ATP5HO75947 161 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 GIMD1P0DJR0 217 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 PRPS2P11908 318 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 CKMT1AP12532 417 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 CKMT2P17540 419 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 BCL6P41182 706 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 ATP4BP51164 291 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 MNAT1P51948 309 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 YBX1P67809 324 aaKnown RBP9.35□□□□□ -0.91
CCM2-204ENST00000470837 RELAQ04206 551 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 SPEM2Q0P670 501 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 TCF15Q12870 199 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 CUL3Q13618 768 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 NR1D2Q14995 579 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 SF3A2Q15428 464 aaKnown RBP9.35□□□□□ -0.91
CCM2-204ENST00000470837 CSRP2Q16527 193 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 IL23RQ5VWK5 629 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 NKAIN2Q5VXU1 208 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 TMEM198Q66K66 360 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 ZNF425Q6IV72 752 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 GUSBP11Q6P575 273 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 WDR74Q6RFH5 385 aaPredicted RBP9.35□□□□□ -0.91
CCM2-204ENST00000470837 Q6ZSR9 355 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 SPRED1Q7Z699 444 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 CLNKQ7Z7G1 428 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 ASPGQ86U10 573 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 PAQR7Q86WK9 346 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms