RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 RAB2BQ8WUD1 216 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 GLYATL1Q969I3 302 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 TBC1D20Q96BZ9 403 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 AP2M1Q96CW1 435 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 PPP1R16AQ96I34 528 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 ZNF514Q96K75 400 aaPredicted RBP7.73□□□□□ -1.17
SMC4-212ENST00000470240 EBPLQ9BY08 206 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 SMG9Q9H0W8 520 aaKnown RBP7.73□□□□□ -1.17
SMC4-212ENST00000470240 ATG10Q9H0Y0 220 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 EPHX3Q9H6B9 360 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 REEP1Q9H902 201 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 PLGRKTQ9HBL7 147 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 SGK2Q9HBY8 427 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 CCNB1IP1Q9NPC3 277 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 ITM2CQ9NQX7 267 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 DYRK4Q9NR20 520 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 TBC1D23Q9NUY8 699 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 FAM118AQ9NWS6 357 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 SLC25A37Q9NYZ2 338 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 CD84Q9UIB8 345 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 USP22Q9UPT9 525 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 TPRKBQ9Y3C4 175 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 HSPE1-MOB4S4R3N1 261 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 CROCCQ5TZA2 2017 aa7.73□□□□□ -1.17
SMC4-212ENST00000470240 PLXNA2O75051 1894 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 GNG14A0A1W2PPG7 69 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 OR2AG2A6NM03 316 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 ARHGEF33A8MVX0 844 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 MYO1GB0I1T2 1018 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 C1QTNF9BB2RNN3 333 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 FAM229AH3BQW9 127 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 SCAMP2O15127 329 aaKnown RBP7.72□□□□□ -1.17
SMC4-212ENST00000470240 MRPS14O60783 128 aaKnown RBP7.72□□□□□ -1.17
SMC4-212ENST00000470240 LRATO95237 230 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 CLIC3O95833 236 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 ITGB2P05107 769 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 RHOP08100 348 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 NID1P14543 1247 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 CCNA2P20248 432 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 FPR1P21462 350 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 GSTM2P28161 218 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 PBLDP30039 288 aaPredicted RBP7.72□□□□□ -1.17
SMC4-212ENST00000470240 DNAJA1P31689 397 aaKnown RBP7.72□□□□□ -1.17
SMC4-212ENST00000470240 RYKP34925 604 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 CA5AP35218 305 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 CTNNB1P35222 781 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 MMP12P39900 470 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 PRLHRP49683 370 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 PFN3P60673 137 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 GPLD1P80108 840 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 SEMG2Q02383 582 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 UBE3AQ05086 875 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 PPIGQ13427 754 aaKnown RBP eCLIP7.72□□□□□ -1.172e-27■■■■■ 81.9
SMC4-212ENST00000470240 NAE1Q13564 534 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 VEZF1Q14119 521 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 RAB39AQ14964 217 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 ZNF77Q15935 545 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 LY6G5CQ5SRR4 150 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 HENMT1Q5T8I9 393 aaKnown RBP7.72□□□□□ -1.17
SMC4-212ENST00000470240 GPR107Q5VW38 600 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 PLPP4Q5VZY2 271 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 OR4F3Q6IEY1 312 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 OR2T5Q6IEZ7 315 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 ZCCHC8Q6NZY4 707 aaKnown RBP7.72□□□□□ -1.17
SMC4-212ENST00000470240 AGTRAPQ6RW13 159 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 Q6ZVL8 140 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 ZNF765Q7L2R6 523 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 ADIPOR2Q86V24 386 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 ANKRD46Q86W74 232 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 SLC30A8Q8IWU4 369 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 MSRB3Q8IXL7 192 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 SYTL1Q8IYJ3 562 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 PHACTR4Q8IZ21 702 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 FBXO15Q8NCQ5 510 aaPredicted RBP7.72□□□□□ -1.17
SMC4-212ENST00000470240 OR8J2Q8NGG1 315 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 OR2T29Q8NH02 315 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 OR8D1Q8WZ84 308 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 TMIGD2Q96BF3 282 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 PYCR2Q96C36 320 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 C12orf43Q96C57 262 aaKnown RBP7.72□□□□□ -1.17
SMC4-212ENST00000470240 APIPQ96GX9 242 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 FCRL1Q96LA6 429 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 MUS81Q96NY9 551 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 P2RY13Q9BPV8 354 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 BCL7BQ9BQE9 202 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 EFCAB11Q9BUY7 163 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 DUSP26Q9BV47 211 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 RIOK2Q9BVS4 552 aaKnown RBP7.72□□□□□ -1.17
SMC4-212ENST00000470240 REXO4Q9GZR2 422 aaKnown RBP7.72□□□□□ -1.17
SMC4-212ENST00000470240 GABARAPL1Q9H0R8 117 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 ABCG8Q9H221 673 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 NTN4Q9HB63 628 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 IL23AQ9NPF7 189 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 TLR9Q9NR96 1032 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 AASDHPPTQ9NRN7 309 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 STOX2Q9P2F5 926 aaPredicted RBP7.72□□□□□ -1.17
SMC4-212ENST00000470240 ENOPH1Q9UHY7 261 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 SLCO3A1Q9UIG8 710 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 BTNL2Q9UIR0 455 aa7.72□□□□□ -1.17
SMC4-212ENST00000470240 DLGAP4Q9Y2H0 992 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms