RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 SMPDL3AQ92484 453 aa17.86■□□□□ 0.45
NCKIPSD-209ENST00000470006 NINJ1Q92982 152 aa17.86■□□□□ 0.45
NCKIPSD-209ENST00000470006 TMEM125Q96AQ2 219 aa17.86■□□□□ 0.45
NCKIPSD-209ENST00000470006 OR2A5Q96R48 311 aa17.86■□□□□ 0.45
NCKIPSD-209ENST00000470006 OLFM1Q99784 485 aa17.86■□□□□ 0.45
NCKIPSD-209ENST00000470006 MMP25Q9NPA2 562 aa17.86■□□□□ 0.45
NCKIPSD-209ENST00000470006 TAC3Q9UHF0 121 aa17.86■□□□□ 0.45
NCKIPSD-209ENST00000470006 FLNAP21333 2647 aaKnown RBP17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 P2RX6O15547 441 aa17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 NME2P1O60361 137 aa17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 PRMT3O60678 531 aa17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 ZNF189O75820 626 aaPredicted RBP17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 TJP3O95049 919 aa17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 CCNDBP1O95273 360 aa17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 EZRP15311 586 aaKnown RBP17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 NME2P22392 152 aa17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 RFC3P40938 356 aa17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 CETN2P41208 172 aa17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 TFF3Q07654 80 aa17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 PTK6Q13882 451 aa17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 SFT2D3Q587I9 215 aa17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 TSTD2Q5T7W7 516 aa17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 PPP1R21Q6ZMI0 780 aa17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 LPAR4Q99677 370 aa17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 POLDIP3Q9BY77 421 aaKnown RBP17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 ABHD10Q9NUJ1 306 aa17.85■□□□□ 0.45
NCKIPSD-209ENST00000470006 H0YIG0 161 aa17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 CYC1P08574 325 aa17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 CYB561P49447 251 aa17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 PMPCAQ10713 525 aa17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 CDH17Q12864 832 aa17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 TRIM14Q14142 442 aa17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 NSDHLQ15738 373 aa17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 ANKRD20A4Q4UJ75 823 aa17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 ZNF468Q5VIY5 522 aaPredicted RBP17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 ICE2Q659A1 982 aa17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 CAVIN1Q6NZI2 390 aaKnown RBP17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 ZNF534Q76KX8 674 aa17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 RPS19BP1Q86WX3 136 aaKnown RBP17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 PLD3Q8IV08 490 aa17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 OR9A1PQ8NGU1 263 aa17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 TP63Q9H3D4 680 aaPredicted RBP17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 CATSPERZQ9NTU4 200 aa17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 ST6GALNAC2Q9UJ37 374 aa17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 EFR3BQ9Y2G0 817 aa17.84■□□□□ 0.45
NCKIPSD-209ENST00000470006 IGKV1-8A0A0C4DH67 115 aa17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 PDE9AO76083 593 aa17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 DNASE1P24855 282 aa17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 MAGEA1P43355 309 aa17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 TTPAP49638 278 aa17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 MEOX1P50221 254 aa17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 HADHBP55084 474 aaKnown RBP17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 PRDX1Q06830 199 aaKnown RBP17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 Q71RC1 249 aaPredicted RBP17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 SHISA5Q8N114 240 aa17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 ARHGEF39Q8N4T4 335 aa17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 POGLUT1Q8NBL1 392 aa17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 OR10Q1Q8NGQ4 319 aa17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 ZNF778Q96MU6 729 aa17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 LIME1Q9H400 295 aa17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 EDARQ9UNE0 448 aa17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 HRH3Q9Y5N1 445 aa17.83■□□□□ 0.44
NCKIPSD-209ENST00000470006 FAM237BA0A1B0GVD1 139 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 SGK494L7N484 410 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 HAT1O14929 419 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 HS6ST1O60243 411 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 NDUFS3O75489 264 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 CDC123O75794 336 aaPredicted RBP17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 NSA2O95478 260 aaKnown RBP17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 FOSL1P15407 271 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 IL1RNP18510 177 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 ADRA1DP25100 572 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 TPP2P29144 1249 aaPredicted RBP17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 DGKQP52824 942 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 EIF3BP55884 814 aaKnown RBP17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 OR4D2P58180 307 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 LTBQ06643 244 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 ABRAXAS2Q15018 415 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 THEMIS2Q5TEJ8 643 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 ZNF425Q6IV72 752 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 C11orf63Q6NUN7 778 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 PRSS41Q7RTY9 318 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 OTUD6BQ8N6M0 293 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 PPFIBP2Q8ND30 876 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 SEC16BQ96JE7 1060 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 RBCK1Q9BYM8 510 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 PLEKHA6Q9Y2H5 1048 aa17.82■□□□□ 0.44
NCKIPSD-209ENST00000470006 KLRC4-KLRK1H3BQV0 150 aa17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 CD3EAPO15446 510 aaKnown RBP17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 TFEBP19484 476 aa17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 ITGA8P53708 1063 aa17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 PNLIPRP1P54315 467 aa17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 USP10Q14694 798 aaKnown RBP17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 MEI1Q5TIA1 1274 aa17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 AADACL2Q6P093 401 aa17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 ACAD11Q709F0 780 aa17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 LGI4Q8N135 537 aa17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 RPRMLQ8N4K4 120 aa17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 KIF2BQ8N4N8 673 aa17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 MYRIPQ8NFW9 859 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms