RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 CARTPTQ16568 116 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 DPY19L1Q2PZI1 675 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 RNF212Q495C1 297 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 GPR33Q49SQ1 333 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 ATP13A4Q4VNC1 1196 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 Q5BKY6 102 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 PABPC1L2AQ5JQF8 200 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 EEF1A1P5Q5VTE0 462 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 TMEM236Q5W0B7 351 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 CD276Q5ZPR3 534 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 HEATR6Q6AI08 1181 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF425Q6IV72 752 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 PYHIN1Q6K0P9 492 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 LIN54Q6MZP7 749 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 CES5AQ6NT32 575 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 SLC27A4Q6P1M0 643 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 C3orf33Q6P1S2 294 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 KIAA1324Q6UXG2 1013 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 IKBIPQ70UQ0 350 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 LRRC8DQ7L1W4 858 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 GPR155Q7Z3F1 870 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 SLC46A3Q7Z3Q1 461 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 MCATQ8IVS2 390 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 SKA3Q8IX90 412 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 C9orf62Q8N4C0 152 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 TBC1D19Q8N5T2 526 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 RNF148Q8N7C7 305 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 ZBTB44Q8NCP5 570 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF540Q8NDQ6 660 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 FAM83FQ8NEG4 500 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 LPCAT1Q8NF37 534 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 OR52H1Q8NGJ2 320 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 OR9Q1Q8NGQ5 310 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 RNASE11Q8TAA1 199 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 SPPL2BQ8TCT7 592 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 MAPK15Q8TD08 544 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 STYXQ8WUJ0 223 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 ASB13Q8WXK3 278 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 POMGNT1Q8WZA1 660 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 NELL1Q92832 810 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 NSUN4Q96CB9 384 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 LRRC58Q96CX6 371 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 C19orf60Q96EN9 201 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 PDLIM5Q96HC4 596 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 KLHL15Q96M94 604 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 COL21A1Q96P44 957 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 PIGSQ96S52 555 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 FIZ1Q96SL8 496 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 NELL2Q99435 816 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 MMP19Q99542 508 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 HSD17B14Q9BPX1 270 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 C11orf70Q9BRQ4 267 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 MARVELD1Q9BSK0 173 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 GSDMCQ9BYG8 508 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 ACTR6Q9GZN1 396 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 MIR1-1HGQ9H1L0 117 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 OR51M1Q9H341 326 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 NCOR1P1Q9H4R4 102 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 NSUN3Q9H649 340 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 GREM2Q9H772 168 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 NMUR1Q9HB89 426 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF334Q9HCZ1 680 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 EQTNQ9NQ60 294 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 PLSCR3Q9NRY6 295 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 EXD2Q9NVH0 621 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 C19orf73Q9NVV2 129 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 COA4Q9NYJ1 87 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 MLXQ9UH92 298 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 NUFIP1Q9UHK0 495 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 PURGQ9UJV8 347 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 AGO1Q9UL18 857 aaKnown RBP4.71□□□□□ -1.66
SF3B1-207ENST00000468925 MGAT4BQ9UQ53 548 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 INVSQ9Y283 1065 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 BTRCQ9Y297 605 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 MFHAS1Q9Y4C4 1052 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 PCDHB14Q9Y5E9 798 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 PCDHA9Q9Y5H5 950 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 MICAL3Q7RTP6 2002 aa4.71□□□□□ -1.66
SF3B1-207ENST00000468925 BAZ2AQ9UIF9 1905 aaKnown RBP4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TRAV20A0A0B4J274 112 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 A0A0G2JPF8 293 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 A0A0J9YYE9 177 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 GLYATL1P3A0A0U1RQE8 302 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 A0A1B0GWJ7 208 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 A0A1W2PPL8 197 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 LOC390937A0A1W2PQ73 354 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TCRBV7S3A2A0A539 114 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TCRBV5S1A1TA0A578 114 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 FAM86C2PA6NEL3 165 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 HNRNPCL3B7ZW38 293 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 PTGES3LE9PB15 166 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TEX46H3BTG2 121 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 K7ENM7 598 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 SGK494L7N484 410 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 AIPO00170 330 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 SULT1C2O00338 296 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 E2F3O00716 465 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 ADAMTS3O15072 1205 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms