RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 HNF4AP41235 474 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 ELAVL2Q12926 359 aaKnown RBP3.01□□□□□ -1.93
XRN1-206ENST00000467077 CUL4AQ13619 759 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 HNRNPDQ14103 355 aaKnown RBP3.01□□□□□ -1.93
XRN1-206ENST00000467077 VGLL4Q14135 290 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 KRT33BQ14525 404 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 DCAF10Q5QP82 559 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 SZRD1Q7Z422 152 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 RPAP2Q8IXW5 612 aaPredicted RBP3.01□□□□□ -1.93
XRN1-206ENST00000467077 C1orf131Q8NDD1 294 aaKnown RBP3.01□□□□□ -1.93
XRN1-206ENST00000467077 FAM120BQ96EK7 910 aaKnown RBP3.01□□□□□ -1.93
XRN1-206ENST00000467077 NSL1Q96IY1 281 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 C16orf70Q9BSU1 422 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 VN1R1Q9GZP7 353 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 COA1Q9GZY4 146 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 UPF3AQ9H1J1 476 aaKnown RBP3.01□□□□□ -1.93
XRN1-206ENST00000467077 CCDC68Q9H2F9 335 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 NSMCE4AQ9NXX6 385 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 FLRT3Q9NZU0 649 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 SEC63Q9UGP8 760 aaKnown RBP3.01□□□□□ -1.93
XRN1-206ENST00000467077 PTPRFP10586 1907 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 DOCK2Q92608 1830 aa3□□□□□ -1.93
XRN1-206ENST00000467077 ATAD5Q96QE3 1844 aa3□□□□□ -1.93
XRN1-206ENST00000467077 MAPK8IP3Q9UPT6 1336 aa3□□□□□ -1.93
XRN1-206ENST00000467077 hCG_1807616A0A1W2PRN6 198 aa3□□□□□ -1.93
XRN1-206ENST00000467077 PAPSS1O43252 624 aaPredicted RBP3□□□□□ -1.93
XRN1-206ENST00000467077 AHCYL1O43865 530 aa3□□□□□ -1.93
XRN1-206ENST00000467077 CREG1O75629 220 aa3□□□□□ -1.93
XRN1-206ENST00000467077 GJB3O75712 270 aa3□□□□□ -1.93
XRN1-206ENST00000467077 PIGNO95427 931 aa3□□□□□ -1.93
XRN1-206ENST00000467077 CSH1P0DML2 217 aa3□□□□□ -1.93
XRN1-206ENST00000467077 CSH2P0DML3 217 aa3□□□□□ -1.93
XRN1-206ENST00000467077 PORP16435 677 aaPredicted RBP3□□□□□ -1.93
XRN1-206ENST00000467077 ACTN2P35609 894 aa3□□□□□ -1.93
XRN1-206ENST00000467077 PRKCZQ05513 592 aa3□□□□□ -1.93
XRN1-206ENST00000467077 WTAPQ15007 396 aa3□□□□□ -1.93
XRN1-206ENST00000467077 LRIT3Q3SXY7 679 aa3□□□□□ -1.93
XRN1-206ENST00000467077 RILPL1Q5EBL4 403 aa3□□□□□ -1.93
XRN1-206ENST00000467077 RAB41Q5JT25 222 aa3□□□□□ -1.93
XRN1-206ENST00000467077 DMKNQ6E0U4 476 aaPredicted RBP3□□□□□ -1.93
XRN1-206ENST00000467077 C16orf54Q6UWD8 224 aa3□□□□□ -1.93
XRN1-206ENST00000467077 HAUS6Q7Z4H7 955 aa3□□□□□ -1.93
XRN1-206ENST00000467077 AACSQ86V21 672 aa3□□□□□ -1.93
XRN1-206ENST00000467077 TDHQ8IZJ6 230 aa3□□□□□ -1.93
XRN1-206ENST00000467077 RNF128Q8TEB7 428 aa3□□□□□ -1.93
XRN1-206ENST00000467077 SAT2Q96F10 170 aaPredicted RBP3□□□□□ -1.93
XRN1-206ENST00000467077 ZBED3Q96IU2 234 aaPredicted RBP3□□□□□ -1.93
XRN1-206ENST00000467077 DEFB118Q96PH6 123 aa3□□□□□ -1.93
XRN1-206ENST00000467077 OR6C1Q96RD1 312 aa3□□□□□ -1.93
XRN1-206ENST00000467077 P2RY12Q9H244 342 aa3□□□□□ -1.93
XRN1-206ENST00000467077 KCNK15Q9H427 330 aa3□□□□□ -1.93
XRN1-206ENST00000467077 INTS9Q9NV88 658 aaKnown RBP3□□□□□ -1.93
XRN1-206ENST00000467077 LARSQ9P2J5 1176 aaKnown RBP3□□□□□ -1.93
XRN1-206ENST00000467077 OSGIN1Q9UJX0 560 aa3□□□□□ -1.93
XRN1-206ENST00000467077 PLAGL1Q9UM63 463 aa3□□□□□ -1.93
XRN1-206ENST00000467077 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3□□□□□ -1.93
XRN1-206ENST00000467077 LTBP2Q14767 1821 aa3□□□□□ -1.93
XRN1-206ENST00000467077 DOCK3Q8IZD9 2030 aa3□□□□□ -1.93
XRN1-206ENST00000467077 MAST2Q6P0Q8 1798 aa3□□□□□ -1.93
XRN1-206ENST00000467077 CEP290O15078 2479 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 DOCK1Q14185 1865 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 PLXNB2O15031 1838 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 PHIPQ8WWQ0 1821 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 LOC101059948A0A1B0GTJ6 334 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 A0A1W2PN81 502 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 B4DLN1 442 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 TCP10L2B9ZVM9 353 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 PDHXO00330 501 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 EFNA1P20827 205 aaPredicted RBP2.99□□□□□ -1.93
XRN1-206ENST00000467077 PPP2R1AP30153 589 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 ACSL1P33121 698 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 CHRNA7P36544 502 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 SLC15A1P46059 708 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 ARSEP51690 589 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 MRPL12P52815 198 aaKnown RBP2.99□□□□□ -1.93
XRN1-206ENST00000467077 PNLIPRP2P54317 469 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 RIPK4P57078 832 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 CX3CL1P78423 397 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 CHAF1BQ13112 559 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 TOMM20Q15388 145 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 MDH1BQ5I0G3 518 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 CYP4A22Q5TCH4 519 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 KHDRBS2Q5VWX1 349 aaKnown RBP2.99□□□□□ -1.93
XRN1-206ENST00000467077 LDB1Q86U70 411 aaPredicted RBP2.99□□□□□ -1.93
XRN1-206ENST00000467077 FAM114A1Q8IWE2 563 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 C17orf53Q8N3J3 647 aaPredicted RBP2.99□□□□□ -1.93
XRN1-206ENST00000467077 CERS5Q8N5B7 392 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 TMEM178AQ8NBL3 297 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 PPFIBP2Q8ND30 876 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 PAPD5Q8NDF8 572 aaKnown RBP2.99□□□□□ -1.93
XRN1-206ENST00000467077 OR2AJ1Q8NGZ0 328 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 OR2T11Q8NH01 316 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 FAM122AQ96E09 287 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 CALML4Q96GE6 196 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 GUCD1Q96NT3 240 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 PLEKHF1Q96S99 279 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 SPATC1LQ9H0A9 340 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 ARRDC1-AS1Q9H2J1 176 aa2.99□□□□□ -1.93
XRN1-206ENST00000467077 PNNQ9H307 717 aaKnown RBP2.99□□□□□ -1.93
XRN1-206ENST00000467077 TDRD3Q9H7E2 651 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms