RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 TUBB6Q9BUF5 446 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.14■□□□□ 0.49
COL9A3-206ENST00000466532 ADAMTS6Q9UKP5 1117 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 KCNE1BA0A087WTH5 132 aa18.13■□□□□ 0.49
COL9A3-206ENST00000466532 NSA2O95478 260 aaKnown RBP18.13■□□□□ 0.49
COL9A3-206ENST00000466532 RGS4P49798 205 aa18.13■□□□□ 0.49
COL9A3-206ENST00000466532 INAQ16352 499 aa18.13■□□□□ 0.49
COL9A3-206ENST00000466532 HIBCHQ6NVY1 386 aaPredicted RBP18.13■□□□□ 0.49
COL9A3-206ENST00000466532 MBOAT1Q6ZNC8 495 aa18.13■□□□□ 0.49
COL9A3-206ENST00000466532 PRSS41Q7RTY9 318 aa18.13■□□□□ 0.49
COL9A3-206ENST00000466532 EEF1AKMT1Q8WVE0 214 aa18.13■□□□□ 0.49
COL9A3-206ENST00000466532 IMMP1LQ96LU5 166 aa18.13■□□□□ 0.49
COL9A3-206ENST00000466532 CCDC138Q96M89 665 aa18.13■□□□□ 0.49
COL9A3-206ENST00000466532 TAAR6Q96RI8 345 aa18.13■□□□□ 0.49
COL9A3-206ENST00000466532 MACROD1Q9BQ69 325 aa18.13■□□□□ 0.49
COL9A3-206ENST00000466532 VN1R1Q9GZP7 353 aa18.13■□□□□ 0.49
COL9A3-206ENST00000466532 PCBD2Q9H0N5 130 aa18.13■□□□□ 0.49
COL9A3-206ENST00000466532 SH2B3Q9UQQ2 575 aa18.13■□□□□ 0.49
COL9A3-206ENST00000466532 PDE10AQ9Y233 779 aa18.13■□□□□ 0.49
COL9A3-206ENST00000466532 WDPCPO95876 746 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 C8GP07360 202 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 IL1RNP18510 177 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 PGAM1P18669 254 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 CSNK1G2P78368 415 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 CRYMQ14894 314 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 MINDY4Q4G0A6 757 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 RNASEH2BQ5TBB1 312 aaKnown RBP18.12■□□□□ 0.49
COL9A3-206ENST00000466532 ABHD17BQ5VST6 288 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 ZNF324BQ6AW86 544 aaPredicted RBP18.12■□□□□ 0.49
COL9A3-206ENST00000466532 AGTRAPQ6RW13 159 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 C17orf64Q86WR6 236 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 PALM2Q8IXS6 379 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 MYO1HQ8N1T3 1032 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 CAMKVQ8NCB2 501 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 C2CD4AQ8NCU7 369 aaPredicted RBP18.12■□□□□ 0.49
COL9A3-206ENST00000466532 OR51Q1Q8NH59 317 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 ZCCHC10Q8TBK6 192 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 NR4A3Q92570 626 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 ALKBH8Q96BT7 664 aaKnown RBP18.12■□□□□ 0.49
COL9A3-206ENST00000466532 THAP11Q96EK4 314 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 ATG10Q9H0Y0 220 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 TAS2R13Q9NYV9 303 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 HCN3Q9P1Z3 774 aa18.12■□□□□ 0.49
COL9A3-206ENST00000466532 IGHV3-20A0A0C4DH32 117 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 GOLGA6L10A0A0M3HER8 536 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 FEZF1A0PJY2 475 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 ZG16O60844 167 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 SEC24DO94855 1032 aaPredicted RBP18.11■□□□□ 0.49
COL9A3-206ENST00000466532 STSP08842 583 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 XCR1P46094 333 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 FNTAP49354 379 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 TDGF1P3P51864 188 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 TIAL1Q01085 375 aaKnown RBP eCLIP18.11■□□□□ 0.49
COL9A3-206ENST00000466532 ZNF33BQ06732 778 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 SP140Q13342 867 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 PPP1R7Q15435 360 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 ZRSR2Q15696 482 aaKnown RBP18.11■□□□□ 0.49
COL9A3-206ENST00000466532 TMEM214Q6NUQ4 689 aaKnown RBP18.11■□□□□ 0.49
COL9A3-206ENST00000466532 LANCL3Q6ZV70 420 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 CPEB2Q7Z5Q1 589 aaKnown RBP18.11■□□□□ 0.49
COL9A3-206ENST00000466532 FJX1Q86VR8 437 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 SHISA5Q8N114 240 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 GABPB2Q8TAK5 448 aaPredicted RBP18.11■□□□□ 0.49
COL9A3-206ENST00000466532 ACTRT1Q8TDG2 376 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 OSBPL9Q96SU4 736 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 CYTH2Q99418 400 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 RNF32Q9H0A6 362 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 PARVBQ9HBI1 364 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 ANKHQ9HCJ1 492 aa18.11■□□□□ 0.49
COL9A3-206ENST00000466532 C19orf25Q9UFG5 118 aaPredicted RBP18.11■□□□□ 0.49
COL9A3-206ENST00000466532 A0A1B0GUH1 482 aa18.1■□□□□ 0.49
COL9A3-206ENST00000466532 OR5H15A6NDH6 313 aa18.1■□□□□ 0.49
COL9A3-206ENST00000466532 SGK494L7N484 410 aa18.1■□□□□ 0.49
COL9A3-206ENST00000466532 CYC1P08574 325 aa18.1■□□□□ 0.49
COL9A3-206ENST00000466532 BCL6P41182 706 aa18.1■□□□□ 0.49
COL9A3-206ENST00000466532 KCNK10P57789 538 aa18.1■□□□□ 0.49
COL9A3-206ENST00000466532 DHX9Q08211 1270 aaKnown RBP18.1■□□□□ 0.49
COL9A3-206ENST00000466532 NAE1Q13564 534 aa18.1■□□□□ 0.49
COL9A3-206ENST00000466532 RBM20Q5T481 1227 aaKnown RBP18.1■□□□□ 0.49
COL9A3-206ENST00000466532 C1QL3Q5VWW1 255 aa18.1■□□□□ 0.49
COL9A3-206ENST00000466532 PAQR3Q6TCH7 311 aa18.1■□□□□ 0.49
COL9A3-206ENST00000466532 ASPGQ86U10 573 aa18.1■□□□□ 0.49
COL9A3-206ENST00000466532 KCT2Q8NC54 265 aa18.1■□□□□ 0.49
COL9A3-206ENST00000466532 SUN3Q8TAQ9 357 aa18.1■□□□□ 0.49
COL9A3-206ENST00000466532 TM4SF19Q96DZ7 209 aa18.1■□□□□ 0.49
COL9A3-206ENST00000466532 LINGO1Q96FE5 620 aa18.1■□□□□ 0.49
COL9A3-206ENST00000466532 STMN3Q9NZ72 180 aa18.1■□□□□ 0.49
COL9A3-206ENST00000466532 TEKT2Q9UIF3 430 aa18.1■□□□□ 0.49
COL9A3-206ENST00000466532 SLC16A5O15375 505 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 LCMT2O60294 686 aaKnown RBP18.09■□□□□ 0.49
COL9A3-206ENST00000466532 BANF1O75531 89 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 RASAL1O95294 804 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 TTC4O95801 387 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 HIST1H2AGP0C0S8 130 aaPredicted RBP18.09■□□□□ 0.49
COL9A3-206ENST00000466532 CDH1P12830 882 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 HIST1H2ADP20671 130 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 CCND1P24385 295 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 GABRB3P28472 473 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 GRK3P35626 688 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 CDKN2DP55273 166 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms