RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 LRRN3Q9H3W5 708 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 NOL11Q9H8H0 719 aaKnown RBP16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 IPPKQ9H8X2 491 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 PFDN4Q9NQP4 134 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 POMT2Q9UKY4 750 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 FIS1Q9Y3D6 152 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 DNAJC15Q9Y5T4 150 aa16.27■□□□□ 0.19
EXOSC3-203ENST00000465229 COL5A1P20908 1838 aaPredicted RBP16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 OR7A17O14581 309 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 CAPN5O15484 640 aaPredicted RBP16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 PRAMEF4O60810 478 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 ESRRBO95718 433 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 RPLP0P05388 317 aaKnown RBP16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 GP1BAP07359 652 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 CSF2RBP32927 897 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 GCKP35557 465 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 LSSP48449 732 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 PIK3CGP48736 1102 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 ACADVLP49748 655 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 PKNOX1P55347 436 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 PRAMEF9Q5VWM5 478 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 CLEC6AQ6EIG7 209 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 IRGCQ6NXR0 463 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 TRIM73Q86UV7 250 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 OR52B6Q8NGF0 335 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 TWIST2Q8WVJ9 160 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 ANKRD27Q96NW4 1050 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 ZNF382Q96SR6 550 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 EFCAB1Q9HAE3 211 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 GPRC5BQ9NZH0 403 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 DYRK1BQ9Y463 629 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 L3MBTL1Q9Y468 752 aa16.26■□□□□ 0.19
EXOSC3-203ENST00000465229 IGKV1-8A0A0C4DH67 115 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 A0A1B0GTL3 188 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 TM4SF5O14894 197 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 KATNA1O75449 491 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 HOXB3P14651 431 aaPredicted RBP16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 GNAZP19086 355 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 GFERP55789 205 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 ABATP80404 500 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 PCDH1Q08174 1060 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 SLC5A12Q1EHB4 618 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 SWT1Q5T5J6 900 aaKnown RBP16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 KIAA1614Q5VZ46 1190 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 WDR74Q6RFH5 385 aaPredicted RBP16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 SLCO4C1Q6ZQN7 724 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 C17orf64Q86WR6 236 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 PLXDC1Q8IUK5 500 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 DEFB107AQ8IZN7 70 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 NETO1Q8TDF5 533 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 SLC5A11Q8WWX8 675 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 STMN2Q93045 179 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 ZDHHC12Q96GR4 267 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 NUDT22Q9BRQ3 303 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 MRPS30Q9NP92 439 aaKnown RBP16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 CUEDC1Q9NWM3 386 aaPredicted RBP16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 NKX1-2Q9UD57 310 aaPredicted RBP16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 ZNF225Q9UK10 706 aa16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 ATXN7L1Q9ULK2 861 aaPredicted RBP16.25■□□□□ 0.19
EXOSC3-203ENST00000465229 E7EQ34 232 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 PSMG1O95456 288 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 C9P02748 559 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 UROSP10746 265 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 CDH1P12830 882 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 CMPK1P30085 196 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 MTTPP55157 894 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 STX5Q13190 355 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 TRIP6Q15654 476 aaKnown RBP16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 CATSPEREQ5SY80 951 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 TMPRSS9Q7Z410 1059 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 DEFB124Q8NES8 71 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 ATP6V1E2Q96A05 226 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 CLPTM1LQ96KA5 538 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 TGM7Q96PF1 710 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 NTMT1Q9BV86 223 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 SLC6A20Q9NP91 592 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 TMEM9Q9P0T7 183 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 KLHL20Q9Y2M5 609 aa16.24■□□□□ 0.19
EXOSC3-203ENST00000465229 H7BY64 318 aa16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 PSMD12O00232 456 aaPredicted RBP16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 NTN3O00634 580 aaPredicted RBP16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 CLGNO14967 610 aa16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 KIF1CO43896 1103 aaKnown RBP16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 CCNDBP1O95273 360 aa16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 FKBP9O95302 570 aa16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 ANP32DO95626 131 aa16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 CPNE6O95741 557 aa16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 CHEK2O96017 543 aa16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 GRIA3P42263 894 aa16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 MRPL19P49406 292 aaKnown RBP16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 TBL3Q12788 808 aaKnown RBP16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 TRAF3Q13114 568 aa16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 CHIT1Q13231 466 aa16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 RBBP7Q16576 425 aa16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 C1orf146Q5VVC0 180 aa16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 NXPE4Q6UWF7 544 aa16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 ZNF574Q6ZN55 896 aaPredicted RBP16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 RIPOR1Q6ZS17 1223 aa16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 FAM92BQ6ZTR7 304 aa16.23■□□□□ 0.19
EXOSC3-203ENST00000465229 DSELQ8IZU8 1212 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms