RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 CD22P20273 847 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 SRSF6Q13247 344 aaKnown RBP19.34■□□□□ 0.69
NUP43-205ENST00000463048 GRM7Q14831 915 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 FAM219BQ5XKK7 198 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 ADNP2Q6IQ32 1131 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 TLDC1Q6P9B6 456 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 ASPGQ86U10 573 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 CACNA2D3Q8IZS8 1091 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 NLGN4XQ8N0W4 816 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 IL22RA1Q8N6P7 574 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 CCNYL1Q8N7R7 359 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 ZNF248Q8NDW4 579 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 NLGN4YQ8NFZ3 816 aaPredicted RBP19.34■□□□□ 0.69
NUP43-205ENST00000463048 ZCCHC10Q8TBK6 192 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 CCT6BQ92526 530 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 MR1Q95460 341 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 PGM2Q96G03 612 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 CDK15Q96Q40 435 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 SPRY4Q9C004 299 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 B3GNT4Q9C0J1 378 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 ACTR8Q9H981 624 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 KCNK9Q9NPC2 374 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 CUTCQ9NTM9 273 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 DKK4Q9UBT3 224 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 RUVBL1Q9Y265 456 aaKnown RBP19.34■□□□□ 0.69
NUP43-205ENST00000463048 TMEM184BQ9Y519 407 aaPredicted RBP19.34■□□□□ 0.69
NUP43-205ENST00000463048 PCDHB3Q9Y5E6 796 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 CHD8Q9HCK8 2581 aa19.34■□□□□ 0.69
NUP43-205ENST00000463048 NDUFS4O43181 175 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 KLK10O43240 276 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 MED26O95402 600 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 RPS17P08708 135 aaKnown RBP19.33■□□□□ 0.68
NUP43-205ENST00000463048 LIPCP11150 499 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 PCNAP12004 261 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 CD82P27701 267 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 SCTRP47872 440 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 CCNG1P51959 295 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 CLN3Q13286 438 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 UNC50Q53HI1 259 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 LCN10Q6JVE6 187 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 SLC22A9Q8IVM8 553 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.33■□□□□ 0.68
NUP43-205ENST00000463048 KRT78Q8N1N4 520 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 ANKRD53Q8N9V6 530 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 OR52B6Q8NGF0 335 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 SNIP1Q8TAD8 396 aaKnown RBP19.33■□□□□ 0.68
NUP43-205ENST00000463048 TRPC4APQ8TEL6 797 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 SLC13A3Q8WWT9 602 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 NKD1Q969G9 470 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 PTCD3Q96EY7 689 aaKnown RBP19.33■□□□□ 0.68
NUP43-205ENST00000463048 ZNF285Q96NJ3 590 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 TMBIM4Q9HC24 238 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 MKS1Q9NXB0 559 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 SENP1Q9P0U3 644 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 MRPS2Q9Y399 296 aaKnown RBP19.33■□□□□ 0.68
NUP43-205ENST00000463048 AP1M2Q9Y6Q5 423 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 ASPMQ8IZT6 3477 aa19.33■□□□□ 0.68
NUP43-205ENST00000463048 AGPSO00116 658 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 PPP6CO00743 305 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 OR7A17O14581 309 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 CCNYL3P0C7X3 344 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 CXCR2P25025 360 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 EIF2S3P41091 472 aaKnown RBP19.32■□□□□ 0.68
NUP43-205ENST00000463048 HNF4AP41235 474 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 PIK3CGP48736 1102 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 PRKAA2P54646 552 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 HERVK_113P63132 956 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 SNRPNP63162 240 aaKnown RBP19.32■□□□□ 0.68
NUP43-205ENST00000463048 NFKB2Q00653 900 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 ZNF678Q5SXM1 525 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 TMIGD1Q6UXZ0 262 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 PROSER1Q86XN7 944 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 C10orf107Q8IVU9 208 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 KCT2Q8NC54 265 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 ZNF483Q8TF39 744 aaPredicted RBP19.32■□□□□ 0.68
NUP43-205ENST00000463048 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.32■□□□□ 0.68
NUP43-205ENST00000463048 MECRQ9BV79 373 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 ERVK-6Q9BXR3 956 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 NLNQ9BYT8 704 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 ZBTB26Q9HCK0 441 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 RNF11Q9Y3C5 154 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 MAU2Q9Y6X3 613 aa19.32■□□□□ 0.68
NUP43-205ENST00000463048 IGF2RP11717 2491 aa19.31■□□□□ 0.68
NUP43-205ENST00000463048 KCNE1BA0A087WTH5 132 aa19.31■□□□□ 0.68
NUP43-205ENST00000463048 MEN1O00255 615 aa19.31■□□□□ 0.68
NUP43-205ENST00000463048 TYROBPO43914 113 aa19.31■□□□□ 0.68
NUP43-205ENST00000463048 SH3BGRLO75368 114 aa19.31■□□□□ 0.68
NUP43-205ENST00000463048 KLK3P07288 261 aaPredicted RBP19.31■□□□□ 0.68
NUP43-205ENST00000463048 IMPDH1P20839 514 aa19.31■□□□□ 0.68
NUP43-205ENST00000463048 ATP1A2P50993 1020 aa19.31■□□□□ 0.68
NUP43-205ENST00000463048 MAGOHP61326 146 aaKnown RBP19.31■□□□□ 0.68
NUP43-205ENST00000463048 RELAQ04206 551 aa19.31■□□□□ 0.68
NUP43-205ENST00000463048 DDX39BQ13838 428 aaKnown RBP19.31■□□□□ 0.68
NUP43-205ENST00000463048 PCLAFQ15004 111 aa19.31■□□□□ 0.68
NUP43-205ENST00000463048 HIST2H2ACQ16777 129 aaPredicted RBP19.31■□□□□ 0.68
NUP43-205ENST00000463048 PRTGQ2VWP7 1150 aa19.31■□□□□ 0.68
NUP43-205ENST00000463048 HIST2H2AA3Q6FI13 130 aa19.31■□□□□ 0.68
NUP43-205ENST00000463048 DTX1Q86Y01 620 aa19.31■□□□□ 0.68
NUP43-205ENST00000463048 ESX1Q8N693 406 aa19.31■□□□□ 0.68
NUP43-205ENST00000463048 CAMKVQ8NCB2 501 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms